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SCNpilot_expt_1000_bf_scaffold_9519

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9519_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..420
DNA (420bp) protein (140aa)
magnesium protoporphyrin chelatase; K03405 magnesium chelatase subunit I [EC:6.6.1.1]
Magnesium protoporphyrin chelatase, putative n=1 Tax=Niabella soli DSM 19437 RepID=H1NPZ0_9SPHI
Magnesium chelatase {ECO:0000313|EMBL:AHF14883.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_9519_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(427..1308)
DNA (882bp) protein (294aa)
Polysaccharide deacetylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2C2_PALPW
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADQ78866.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_expt_1000_bf_scaffold_9519_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1410..2141
DNA (732bp) protein (244aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidyl-prolyl isomerase (EC:5.2.1.8); K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPY7_9SPHI
SCNpilot_expt_1000_bf_scaffold_9519_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2252..2740)
DNA (489bp) protein (163aa)
Transcriptional regulator, AsnC family n=1 Tax=Niabella soli DSM 19437 RepID=H1NPY5_9SPHI
AsnC family transcriptional regulator {ECO:0000313|EMBL:AHF14887.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
transcriptional regulator, AsnC family
SCNpilot_expt_1000_bf_scaffold_9519_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3017..3856
DNA (840bp) protein (280aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPY4_9SPHI
SCNpilot_expt_1000_bf_scaffold_9519_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3880..4311
DNA (432bp) protein (144aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1]
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Segetibacter koreensis RepID=UPI0003604620
SCNpilot_expt_1000_bf_scaffold_9519_7
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4518..4736)
DNA (219bp) protein (73aa)
Plasmid stabilization system n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CS23_ELIME
Plasmid stabilization system {ECO:0000313|EMBL:EOR29951.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
SCNpilot_expt_1000_bf_scaffold_9519_8
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4726..4941)
DNA (216bp) protein (72aa)
antitoxin n=1 Tax=Aquimarina agarilytica RepID=UPI0002891A6A
addiction module antidote protein; K07746 hypothetical protein
Tax=CG_Flavo_02
SCNpilot_expt_1000_bf_scaffold_9519_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6766..7683
DNA (918bp) protein (306aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anti-sigma H sporulation factor LonB; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Niabella aurantiaca RepID=UPI000381DBA5
Displaying 9 items

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