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SCNpilot_expt_1000_bf_scaffold_5208

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5208_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..1724
DNA (1722bp) protein (574aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Glycine dehydrogenase (decarboxylating); K00281 glycine dehydrogenase [EC:1.4.4.2]
glycine dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00037E7EB8
SCNpilot_expt_1000_bf_scaffold_5208_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1838..2674
DNA (837bp) protein (279aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase n=1 Tax=Niabella soli DSM 19437 RepID=H1NN87_9SPHI
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:AHF15341.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_5208_3
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2843..3493
DNA (651bp) protein (217aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ08_CHIPD
Global nitrogen regulator {ECO:0000313|EMBL:KHJ38734.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
SCNpilot_expt_1000_bf_scaffold_5208_4
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3567..4166
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F26ED
Uncharacterized protein {ECO:0000313|EMBL:KEQ30726.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
alkyl hydroperoxide reductase
SCNpilot_expt_1000_bf_scaffold_5208_5
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4256..4501
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QHA2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54122.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5208_6
unknown

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4515..4643
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5208_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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4644..6053
DNA (1410bp) protein (470aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7H7_PALPW rbh
fad-dependent pyridine nucleotide-disulfide oxidoreductase rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_5208_8
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6793..7407
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KTV4_9GAMM
Cytochrome c family protein {ECO:0000313|EMBL:GAL68879.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5208_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7579..7851
DNA (273bp) protein (91aa)
RNP-1 like RNA-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJC6_9SPHI
RNA-binding protein {ECO:0000313|EMBL:AHF14272.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RNP-1 like RNA-binding protein
SCNpilot_expt_1000_bf_scaffold_5208_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7901..8158
DNA (258bp) protein (86aa)
Putative short-chain dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJC7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17108.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5208_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8201..8638
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035EAA81
DNA-binding protein {ECO:0000313|EMBL:AHF14271.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cold-shock protein
SCNpilot_expt_1000_bf_scaffold_5208_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8797..9105)
DNA (309bp) protein (103aa)
DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BCBC1
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KIC91267.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_5208_13
unknown

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9342..9539
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 13 items

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