ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5235

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5235_1
unknown

Not on your lists

2..127
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5235_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

621..1445
DNA (825bp) protein (275aa)
Aminodeoxychorismate lyase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AEW01312.1}; EC=4.1.3.38 {ECO:0000313|EMBL:AEW01312.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aminodeoxychorismate lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W8_NIAKG
SCNpilot_expt_1000_bf_scaffold_5235_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1409..2227)
DNA (819bp) protein (273aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
1,4-dihydroxy-6-naphthoate synthase n=1 Tax=Niabella aurantiaca RepID=UPI000363330D rbh
hypothetical protein; K07083
SCNpilot_expt_1000_bf_scaffold_5235_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2224..2871)
DNA (648bp) protein (216aa)
Futalosine hydrolase {ECO:0000256|HAMAP-Rule:MF_00991}; Short=FL hydrolase {ECO:0000256|HAMAP-Rule:MF_00991};; EC=3.2.2.26 {ECO:0000256|HAMAP-Rule:MF_00991};; Futalosine nucleosidase {ECO:0000256|HAMAP-Rule:MF_00991}; Menaquinone biosynthetic enzyme MqnB {ECO:0000256|HAMAP-Rule:MF_00991}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Futalosine nucleosidase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV2_9SPHI
futalosine nucleosidase
SCNpilot_expt_1000_bf_scaffold_5235_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2914..3342
DNA (429bp) protein (143aa)
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Niabella aurantiaca RepID=UPI000363E81F
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:AHF16736.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_5235_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3387..3794
DNA (408bp) protein (136aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV0_9SPHI
SCNpilot_expt_1000_bf_scaffold_5235_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3846..4442
DNA (597bp) protein (199aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GTP cyclohydrolase 1; K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase n=1 Tax=Niabella aurantiaca RepID=UPI000364F05B
SCNpilot_expt_1000_bf_scaffold_5235_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4501..5391
DNA (891bp) protein (297aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ACP S-malonyltransferase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
ACP S-malonyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI000380D297 rbh
SCNpilot_expt_1000_bf_scaffold_5235_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5606..6118
DNA (513bp) protein (171aa)
Amidohydrolase {ECO:0000313|EMBL:AEV97368.1}; EC=3.5.1.47 {ECO:0000313|EMBL:AEV97368.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE5_NIAKG
amidohydrolase
SCNpilot_expt_1000_bf_scaffold_5235_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6127..6534)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000377B281
Thioredoxin {ECO:0000313|EMBL:AHF16718.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
SCNpilot_expt_1000_bf_scaffold_5235_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6524..7045)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000377B281
Thioredoxin {ECO:0000313|EMBL:AHF16718.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alkyl hydroperoxide reductase
Displaying 11 items

View Taxonomy