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SCNpilot_expt_1000_bf_scaffold_5783

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5783_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..2242)
DNA (2241bp) protein (747aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376FC93
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_5783_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2947..3423)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRS9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17796.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_5783_3
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3467..3862
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E2A56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02071.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_1000_bf_scaffold_5783_4
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3859..4875)
DNA (1017bp) protein (339aa)
Oxidoreductase, (N5,N10-methylenetetrahydromethanopterin reductase) n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X120_FLAB3 rbh
Luciferase {ECO:0000313|EMBL:KIA83870.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
oxidoreductase, (N5,N10-methylenetetrahydromethanopterin reductase) rbh
SCNpilot_expt_1000_bf_scaffold_5783_5
unknown

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comp(4893..5240)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5783_6
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5419..6102)
DNA (684bp) protein (228aa)
Major facilitator superfamily MFS_1 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAG2_FLAJ1
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53446.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
major facilitator transporter
SCNpilot_expt_1000_bf_scaffold_5783_7
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6229..6819)
DNA (591bp) protein (197aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X121_FLAB3
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:BAP30203.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
drug resistance transporter, EmrB/QacA subfamily
SCNpilot_expt_1000_bf_scaffold_5783_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6916..7743)
DNA (828bp) protein (276aa)
cmr:Cycma_3500 extradiol ring-cleavage dioxygenase class III protein subunit B id=717520 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein rbh
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_5783_9
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7866..8366
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FA95_FLAJ1
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABQ07883.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_1000_bf_scaffold_5783_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8417..9016)
DNA (600bp) protein (200aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VKL0_9SPHI
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EFK58812.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
Crp/Fnr family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5783_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9583..10536
DNA (954bp) protein (318aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTB2_9SPHI
SCNpilot_expt_1000_bf_scaffold_5783_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10597..11016
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSZ8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17638.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5783_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11204..11506
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037572C8
Uncharacterized protein {ECO:0000313|EMBL:AHF17569.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_5783_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11588..13249
DNA (1662bp) protein (554aa)
membrane protein n=1 Tax=Niabella aurantiaca RepID=UPI00037BED20 rbh
Membrane protein {ECO:0000313|EMBL:AHF15409.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
sulfate transporter
SCNpilot_expt_1000_bf_scaffold_5783_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13285..13923
DNA (639bp) protein (213aa)
carbonate dehydratase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
carbonic anhydrase n=1 Tax=Niabella aurantiaca RepID=UPI000374041B rbh
SCNpilot_expt_1000_bf_scaffold_5783_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14269..15192
DNA (924bp) protein (308aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
enolase; K01689 enolase [EC:4.2.1.11]
enolase n=1 Tax=Niabella aurantiaca RepID=UPI00035E227B
Displaying 16 items

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