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SCNpilot_expt_1000_bf_scaffold_4114

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4114_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(66..1769)
DNA (1704bp) protein (568aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52) rbh
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ACU05445.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ACU05445.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Beta-N-acetylhexosaminidase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y402_PEDHD rbh
SCNpilot_expt_1000_bf_scaffold_4114_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2324..3595)
DNA (1272bp) protein (424aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I n=1 Tax=Niabella soli DSM 19437 RepID=H1NJE9_9SPHI
SCNpilot_expt_1000_bf_scaffold_4114_3
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3833..5362
DNA (1530bp) protein (510aa)
peptidase M28 n=1 Tax=Gillisia marina RepID=UPI00029AF733
Peptidase M28 {ECO:0000313|EMBL:EHQ02880.1}; Flags: Precursor;; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
peptidase M28
SCNpilot_expt_1000_bf_scaffold_4114_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5931..6188
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKN5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14626.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4114_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6196..6624
DNA (429bp) protein (143aa)
PilT domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKN4_9SPHI
Twitching motility protein PilT {ECO:0000313|EMBL:AHF14627.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
pilt domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4114_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6719..7138)
DNA (420bp) protein (140aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NML3_9SPHI
SCNpilot_expt_1000_bf_scaffold_4114_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7227..8234
DNA (1008bp) protein (336aa)
Phosphoesterase DHHA1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NML2_9SPHI rbh
Exopolyphosphatase {ECO:0000313|EMBL:AHF14668.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4114_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8215..9279
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036BE60A rbh
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
FKBP-type peptidylprolyl isomerase
SCNpilot_expt_1000_bf_scaffold_4114_9
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9674..10018
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000374122A
Sulfurtransferase {ECO:0000313|EMBL:KIA89310.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Rhodanese-related sulfurtransferase
SCNpilot_expt_1000_bf_scaffold_4114_10
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10008..10322
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTW1_CHIPD
Thioredoxin {ECO:0000313|EMBL:KIA91452.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
thioredoxin; K03671 thioredoxin 1
SCNpilot_expt_1000_bf_scaffold_4114_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10306..11031)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMJ4_9SPHI
Fe-S oxidoreductase {ECO:0000313|EMBL:AHF14682.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4114_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11201..11671)
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Niabella aurantiaca RepID=UPI000378871C
SCNpilot_expt_1000_bf_scaffold_4114_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11673..12371)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E166E rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF14680.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4114_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12395..12613)
DNA (219bp) protein (73aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
pyruvate dehydrogenase E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NMJ7_9SPHI
SCNpilot_expt_1000_bf_scaffold_4114_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12615..13406)
DNA (792bp) protein (264aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Niabella aurantiaca RepID=UPI00036B7564
SCNpilot_expt_1000_bf_scaffold_4114_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13597..14805)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000377C567
Uncharacterized protein {ECO:0000313|EMBL:AHF17251.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB family protein
Displaying 16 items

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