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SCNpilot_expt_1000_bf_scaffold_4386

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4386_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..400
DNA (399bp) protein (133aa)
oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI000380221F
Oxidoreductase {ECO:0000313|EMBL:AHF15605.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
oxidoreductase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4386_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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571..1962
DNA (1392bp) protein (464aa)
oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI00037833CC rbh
Oxidoreductase {ECO:0000313|EMBL:AHF15606.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4386_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2010..3326
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036D9E22 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF15607.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4386_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3840..4283
DNA (444bp) protein (148aa)
Crp/Fnr family transcription regulator n=1 Tax=Niabella aurantiaca RepID=UPI0003720478
Crp/Fnr family transcription regulator {ECO:0000313|EMBL:AHF15608.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Crp/FNR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4386_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4403..5515)
DNA (1113bp) protein (371aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31] rbh
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000374D275 rbh
Glycerate kinase {ECO:0000313|EMBL:AHF16447.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_4386_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(5543..6034)
DNA (492bp) protein (164aa)
DUF1801 domain-containing protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2CY45_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_4386_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6061..7281)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000376FB7C
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_4386_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7527..8156)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003812C2A
Membrane protein {ECO:0000313|EMBL:AHF16671.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4386_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8413..9057
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NSD1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18017.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4386_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9044..10399
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381971F rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF18018.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane efflux protein
SCNpilot_expt_1000_bf_scaffold_4386_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10651..11565
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036DAAE2
Uncharacterized protein {ECO:0000313|EMBL:AHF18019.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RND family efflux transporter MFP subunit
Displaying 11 items

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