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SCNpilot_expt_1000_bf_scaffold_6009

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6009_1
unknown

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3..164
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6009_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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261..1595
DNA (1335bp) protein (445aa)
Polysaccharide biosynthesis protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ57_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17060.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
polysaccharide biosynthesis protein rbh
SCNpilot_expt_1000_bf_scaffold_6009_3
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1615..2778
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5USR5_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:CCZ81095.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
glycosyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_6009_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2706..4520)
DNA (1815bp) protein (605aa)
FAD dependent oxidoreductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ58_9SPHI rbh
GMC family oxidoreductase {ECO:0000313|EMBL:AHF14162.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6009_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4475..5035)
DNA (561bp) protein (187aa)
Twin-arginine translocation pathway signal n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ59_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17059.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6009_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5206..6414)
DNA (1209bp) protein (403aa)
Glycosyl transferase group 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ66_9SPHI rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:AHF14157.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
group 1 glycosyl transferase rbh
SCNpilot_expt_1000_bf_scaffold_6009_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6433..7236)
DNA (804bp) protein (268aa)
glycosyl transferase family 2 n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6DFBD
Uncharacterized protein {ECO:0000313|EMBL:ETZ22608.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_6009_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7233..8363)
DNA (1131bp) protein (377aa)
D-inositol-3-phosphate glycosyltransferase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NMP8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ28842.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_6009_9
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8377..9135)
DNA (759bp) protein (253aa)
Glycosyltransferase probably involved in cell wall biogenesis n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW93_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ22605.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
cell wall biosynthesis glycosyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_6009_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9286..9567)
DNA (282bp) protein (94aa)
Cell wall biogenesis glycosyltransferase-like protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y204_9SPHI
Cell wall biogenesis glycosyltransferase-like protein {ECO:0000313|EMBL:EHQ25707.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
cell wall biogenesis glycosyltransferase-like protein
SCNpilot_expt_1000_bf_scaffold_6009_11
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9540..10232)
DNA (693bp) protein (231aa)
Putative acetyl transferase n=1 Tax=Pedobacter sp. BAL39 RepID=A6E8A4_9SPHI
Contig6, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78776.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_6009_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10268..11731)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ68_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF14155.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6009_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11762..12940)
DNA (1179bp) protein (393aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ69_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17055.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
lipopolysaccharide biosynthesis protein
Displaying 13 items

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