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SCNpilot_expt_1000_bf_scaffold_6610

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6610_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13..1425)
DNA (1413bp) protein (471aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NP67_9SPHI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_6610_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1539..1739)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003719D22
Uncharacterized protein {ECO:0000313|EMBL:KHJ37381.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SCNpilot_expt_1000_bf_scaffold_6610_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1736..2458)
DNA (723bp) protein (241aa)
ABC transporter permease n=1 Tax=Niabella aurantiaca RepID=UPI00035E0B69 rbh
ABC transporter permease {ECO:0000313|EMBL:AHF15088.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cytochrome c assembly protein; K02195 heme exporter protein C
SCNpilot_expt_1000_bf_scaffold_6610_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2647..3345)
DNA (699bp) protein (233aa)
Cytochrome c-type biogenesis protein CcmB n=1 Tax=Niabella soli DSM 19437 RepID=H1NP70_9SPHI rbh
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHF15087.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cytochrome c-type biogenesis protein CcmB; K02194 heme exporter protein B
SCNpilot_expt_1000_bf_scaffold_6610_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3321..3893)
DNA (573bp) protein (191aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21]
thymidine kinase n=1 Tax=Niabella aurantiaca RepID=UPI0003679F1D rbh
SCNpilot_expt_1000_bf_scaffold_6610_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3983..4714
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003821A04
Uncharacterized protein {ECO:0000313|EMBL:AHF17450.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6610_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4945..5997)
DNA (1053bp) protein (351aa)
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP73_9SPHI
3-deoxy-D-manno-octulosonic acid transferase {ECO:0000313|EMBL:AHF15085.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_6610_8
unknown

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comp(6063..6272)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6610_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6587..7030
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E8453
Pleiotropic regulatory protein {ECO:0000313|EMBL:AHF15084.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glutamine--scyllo-inositol transaminase
Displaying 9 items

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