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SCNpilot_expt_1000_bf_scaffold_2946

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2946_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..282
DNA (282bp) protein (94aa)
Transcriptional regulator, ArsR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5N5_ACIDE
transcriptional regulator, ArsR family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_2946_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

471..929
DNA (459bp) protein (153aa)
lactoylglutathione lyase (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Lactoylglutathione lyase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5P9_ALIDK
SCNpilot_expt_1000_bf_scaffold_2946_3
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(864..1814)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZX27_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF98488.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
SCNpilot_expt_1000_bf_scaffold_2946_4
unknown

Not on your lists

comp(1920..2120)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2946_5
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2243..4279)
DNA (2037bp) protein (679aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00035CD807 rbh
Uncharacterized protein {ECO:0000313|EMBL:EXI80477.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2946_6
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4273..6249)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZXT1_METMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AEF98510.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2946_7
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6260..6889)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI000373D74A rbh
Uncharacterized protein {ECO:0000313|EMBL:EXI80475.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2946_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6886..7800)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DL2_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ47069.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_1000_bf_scaffold_2946_9
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7904..9667)
DNA (1764bp) protein (588aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
ATP-dependent DNA helicase, Rep (EC:3.6.1.-); K03656 ATP-dependent DNA helicase Rep [EC:3.6.4.12] rbh
Putative ATP-dependent DNA helicase, Rep n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13ZS0_BURXL rbh
SCNpilot_expt_1000_bf_scaffold_2946_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9664..11505)
DNA (1842bp) protein (614aa)
Predicted ATP-dependent endonuclease of the OLD family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13ZS1_BURXL rbh
ATP-dependent endonuclease {ECO:0000313|EMBL:KHL55600.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
ATP-dependent endonuclease; K07459 putative ATP-dependent endonuclease of the OLD family rbh
SCNpilot_expt_1000_bf_scaffold_2946_11
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11530..12447)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI00036C105B rbh
Restriction endonuclease family protein {ECO:0000313|EMBL:KGB98492.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2946_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12444..13361)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XNI3_VARPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGU53864.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_1000_bf_scaffold_2946_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13361..14440)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002376896 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37381.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2946_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14878..15399
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0
DNA repair protein RadC; K03630 DNA repair protein RadC
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_expt_1000_bf_scaffold_2946_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15686..16210
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG3_VARPS
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_expt_1000_bf_scaffold_2946_16
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16422..16769
DNA (348bp) protein (116aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=E7FJ83_9BURK
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_expt_1000_bf_scaffold_2946_17
unknown

Not on your lists

17037..17441
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 17 items

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