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SCNpilot_expt_1000_bf_scaffold_5314

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5314_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2X9_VARPE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38045.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_expt_1000_bf_scaffold_5314_2
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

620..1798
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037BA0E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAL61698.2}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5314_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1989..2402)
DNA (414bp) protein (138aa)
Histone family protein DNA-binding protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0F0_ACIDE
Histone family protein DNA-binding protein {ECO:0000313|EMBL:EER62103.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
histone family protein DNA-binding protein
SCNpilot_expt_1000_bf_scaffold_5314_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2586..3215
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZW5_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER62281.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_expt_1000_bf_scaffold_5314_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3310..3660
DNA (351bp) protein (117aa)
transposase isrso10 n=1 Tax=Acidovorax avenae RepID=UPI0002206A85
IS2 ORF1 {ECO:0000313|EMBL:GAO24299.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
transposase IS3/IS911 family protein
SCNpilot_expt_1000_bf_scaffold_5314_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3657..4550
DNA (894bp) protein (298aa)
transposase n=1 Tax=Acidovorax avenae RepID=UPI0003654FB1 rbh
integrase catalytic region rbh
Integrase catalytic region {ECO:0000313|EMBL:ADX47595.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_expt_1000_bf_scaffold_5314_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4699..5463)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR71_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88830.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_1000_bf_scaffold_5314_8
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5498..6370)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR72_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88831.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_1000_bf_scaffold_5314_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6375..6941)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR73_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88832.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_1000_bf_scaffold_5314_10
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6966..8216)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR74_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88833.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_1000_bf_scaffold_5314_11
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8484..8861
DNA (378bp) protein (126aa)
Helix-turn-helix domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR75_DELSC
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEF88834.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_1000_bf_scaffold_5314_12
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8858..9733
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR76_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88835.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_1000_bf_scaffold_5314_13
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10028..12484)
DNA (2457bp) protein (819aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2H7_RAMTT rbh
Uncharacterized protein {ECO:0000313|EMBL:AEG92340.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5314_14
unknown

Not on your lists

12940..13125
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 14 items

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