name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2123_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..1109
|
Isocitrate lyase AceA {ECO:0000313|EMBL:EYR80422.1}; EC=4.1.3.1 {ECO:0000313|EMBL:EYR80422.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase AceA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVG9_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2123_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1208..1447
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQS2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80421.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2123_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1503..2375)
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036112D5
rbh
LysR family transcriptional regulator
rbh
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:AFL48960.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2123_4
unknown
|
Not on your lists |
2533..2679
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2123_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2726..5248)
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037EFBBF
rbh
Putative chemoreceptor y4fA {ECO:0000313|EMBL:EYR80418.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
chemoreceptor y4fA; K03406 methyl-accepting chemotaxis protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2123_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5487..5723)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BZZ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80417.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2123_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5775..6956)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFG9_9RHIZ
rbh
Flavoprotein, HI0933 family {ECO:0000313|EMBL:EYR80416.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flavoprotein, HI0933 family
|
|
SCNpilot_expt_1000_bf_scaffold_2123_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7122..8561
|
Gamma-glutamylputrescine synthetase PuuA {ECO:0000313|EMBL:EYR80415.1}; EC=6.3.1.11 {ECO:0000313|EMBL:EYR80415.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
puuA; gamma-glutamylputrescine synthetase PuuA (EC:6.3.1.11)
rbh
Gamma-glutamylputrescine synthetase PuuA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4T2_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2123_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8656..9939
|
Putative oxidoreductase OrdL {ECO:0000313|EMBL:EYR80414.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR80414.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative oxidoreductase OrdL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F0G3_9RHIZ
rbh
ordL; FAD dependent oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_2123_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10037..11518
|
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
zwf; hypothetical protein; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CKB2_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2123_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11508..12206
|
6-phosphogluconolactonase Pgl {ECO:0000313|EMBL:EYR80412.1}; EC=3.1.1.31 {ECO:0000313|EMBL:EYR80412.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
6-phosphogluconolactonase Pgl n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0B1_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2123_12
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12203..12844)
|
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FNY4_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU45919.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2123_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12906..14144
|
Phosphogluconate dehydratase Edd {ECO:0000313|EMBL:EYR80411.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EYR80411.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phosphogluconate dehydratase Edd n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D948_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2123_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14242..14655)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4S7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80410.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2123_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14788..15879)
|
Alpha-glucoside transport ATP-binding protein AglK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F0F8_9RHIZ
rbh
Alpha-glucoside transport ATP-binding protein AglK {ECO:0000313|EMBL:EYR80409.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aglK; alpha-glucosides transport system, ATP-binding protein; K10235 alpha-glucoside transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2123_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15947..17605)
|
Putative alpha-glucosidase AglA {ECO:0000313|EMBL:EYR80408.1}; EC=3.2.1.20 {ECO:0000313|EMBL:EYR80408.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
alpha-glucosidase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037B0554
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2123_17
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18252..18878
|
Transcriptional regulator RafR, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27715.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcriptional regulator RafR
|
|
SCNpilot_expt_1000_bf_scaffold_2123_18
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18888..19190)
|
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HTT8_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF86869.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2123_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19208..19489)
|
Plasmid maintenance system killer protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W240_RHILT
Plasmid maintenance system killer protein {ECO:0000313|EMBL:EJC79751.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
plasmid maintenance system killer; K07334 proteic killer suppression protein
|
|
SCNpilot_expt_1000_bf_scaffold_2123_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19557..20756)
|
Alpha-glucoside transport system permease protein AglG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC0_PELHB
rbh
Alpha-glucoside transport system permease protein AglG {ECO:0000313|EMBL:CDP52766.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
alpha-glucoside transport system permease protein AglG; K10234 alpha-glucoside transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2123_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20756..20890)
|
alpha-glucoside ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030AD139
ABC alpha-glucoside transporter, inner membrane su bunit AglF {ECO:0000313|EMBL:CDP52765.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
|