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SCNpilot_expt_1000_bf_scaffold_8612

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8612_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8612_2
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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62..2086
DNA (2025bp) protein (675aa)
Subtilisin-like serine protease n=1 Tax=Rhizobium sp. CF080 RepID=J2RT97_9RHIZ
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EUC00047.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
peptidase S8/S53 subtilisin kexin sedolisin
SCNpilot_expt_1000_bf_scaffold_8612_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2121..3224)
DNA (1104bp) protein (368aa)
Alpha-glucosides ABC transporter, ATP-binding protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHP7_RHIRD rbh
Alpha-glucosides ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGP54116.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
alpha-glucoside ABC transporter ATP-binding protein; K10235 alpha-glucoside transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_8612_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3260..4663)
DNA (1404bp) protein (468aa)
Putative oxidoreductase OrdL {ECO:0000313|EMBL:EYR82695.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR82695.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative oxidoreductase OrdL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQE6_9RHIZ rbh
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_8612_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4660..5529)
DNA (870bp) protein (290aa)
Carbohydrate kinase, PfkB n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHP9_RHIRD rbh
Carbohydrate kinase {ECO:0000313|EMBL:KDP73227.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
sugar kinase, ribokinase rbh
SCNpilot_expt_1000_bf_scaffold_8612_6
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5526..6371)
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVZ7_RHIML
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK78859.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
sugar phosphate isomerase/epimerase rbh
SCNpilot_expt_1000_bf_scaffold_8612_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6383..6748)
DNA (366bp) protein (122aa)
ABC sugar transporter, inner membrane subunit n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHQ1_RHIRD
ABC sugar transporter, inner membrane subunit {ECO:0000313|EMBL:EGP54120.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
ABC-type sugar transport system, permease component
Displaying 7 items

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