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SCNpilot_expt_1000_bf_scaffold_8827

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8827_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..195
DNA (195bp) protein (65aa)
aapP; putative ATP-binding component of a transport system; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
arginine ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003747EA9
Putative ATP-binding component of a transport system {ECO:0000313|EMBL:ACP25094.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_8827_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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576..1226
DNA (651bp) protein (217aa)
L-sulfolactate dehydrogenase ComC {ECO:0000313|EMBL:EYR78355.1}; EC=1.1.1.337 {ECO:0000313|EMBL:EYR78355.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
L-sulfolactate dehydrogenase ComC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVV3_9RHIZ rbh
malate/L-lactate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_8827_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1233..2279)
DNA (1047bp) protein (349aa)
Putative tartrate dehydrogenase/decarboxylase TtuC {ECO:0000313|EMBL:EYR78356.1}; EC=1.1.1.83 {ECO:0000313|EMBL:EYR78356.1};; EC=1.1.1.93 {ECO:0000313|EMBL:EYR78356.1};; EC=4.1.1.73 {ECO:0000313|EMBL:EYR78356.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tartrate dehydrogenase (EC:1.1.1.93 4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] rbh
Putative tartrate dehydrogenase/decarboxylase TtuC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFU9_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_8827_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2341..3726)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EX58_9RHIZ rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EYR78357.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
class III aminotransferase rbh
SCNpilot_expt_1000_bf_scaffold_8827_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3985..4659
DNA (675bp) protein (225aa)
Transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D053_9RHIZ rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EYR78358.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator GntR
SCNpilot_expt_1000_bf_scaffold_8827_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4676..5143)
DNA (468bp) protein (156aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C210_9RHIZ
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EYR79356.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AsnC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8827_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5267..5725
DNA (459bp) protein (153aa)
pdh; pyruvate dehydrogenase (acetyl-transferring); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
pyruvate dehydrogenase E1 subunit beta n=1 Tax=Rhizobium meliloti RepID=UPI0002E1B000
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:AEH82860.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
Displaying 7 items

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