name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1889_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..238
|
Putative esterase of the alpha/beta hydrolase fold containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW11_9RHIZ
Putative esterase of the alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EYR79083.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K07002
|
|
SCNpilot_expt_1000_bf_scaffold_1889_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
322..1425
|
Diguanylate cyclase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRE2_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:EYR79084.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sensory box/GGDEF family protein
|
|
SCNpilot_expt_1000_bf_scaffold_1889_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1422..2900
|
Diguanylate cyclase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRE2_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:EYR79084.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
diguanylate cyclase
|
|
SCNpilot_expt_1000_bf_scaffold_1889_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2960..3280)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ENQ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79085.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1889_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3485..4249
|
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphoribosylaminoimidazolesuccinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=PUR7_SINMW
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1889_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4278..4520
|
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. D
purS; phosphoribosylformylglycinamidine synthase subunit; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMU3_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1889_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4539..4796
|
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWH5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79088.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1889_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4793..5464
|
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=1410620 species
purQ; phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMJ3_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1889_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5595..5987
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWQ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79090.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1889_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5993..6208)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS02_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79091.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1889_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6304..7722
|
Putative transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPG5_9RHIZ
rbh
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:EYR79092.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1889_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7827..8975
|
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacter
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6S9_9RHIZ
purL; phosphoribosylformylglycinamidine synthase II
|
|
SCNpilot_expt_1000_bf_scaffold_1889_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9153..10064
|
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacter
purL; phosphoribosylformylglycinamidine synthase II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6S9_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1889_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10083..10316
|
BolA family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMJ0_9RHIZ
BolA family protein {ECO:0000313|EMBL:EYR79094.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
BolA/YrbA family protein
|
|
SCNpilot_expt_1000_bf_scaffold_1889_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10323..10580
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWP8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79095.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1889_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10920..11255
|
Putative monothiol glutaredoxin-2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRZ7_9RHIZ
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative glutaredoxin-like protein; K07390 monothiol glutaredoxin
|
|
SCNpilot_expt_1000_bf_scaffold_1889_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11339..12586
|
Bicyclomycin resistance protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWG3_9RHIZ
rbh
Bicyclomycin resistance protein {ECO:0000313|EMBL:EYR79097.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Drug resistance transporter, Bcr/CflA subfamily
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1889_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12734..13555)
|
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIV8_9RHIZ
rbh
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EYR79098.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
inositol monophosphatase
|
|
SCNpilot_expt_1000_bf_scaffold_1889_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13562..14383)
|
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT31_9RHIZ
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA
|
|
SCNpilot_expt_1000_bf_scaffold_1889_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14415..15344)
|
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Glutaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNB7_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1889_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15472..15903)
|
30S ribosomal protein S4 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EKT6_9RHIZ
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
|
|
SCNpilot_expt_1000_bf_scaffold_1889_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16310..17821)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSL5_9RHIZ
rbh
Putative ATPase {ECO:0000313|EMBL:EYR79103.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1889_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17939..18226)
|
HigA family addiction module antidote protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1L2_9RHIZ
HigA family addiction module antidote protein {ECO:0000313|EMBL:EYR79104.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
vapI; VapI-like plasmid maintenance system antidote protein
|
|
SCNpilot_expt_1000_bf_scaffold_1889_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18240..18518)
|
HigB toxin protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX11_9RHIZ
HigB toxin protein {ECO:0000313|EMBL:EYR79105.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
plasmid maintenance system killer; K07334 proteic killer suppression protein
|
|
SCNpilot_expt_1000_bf_scaffold_1889_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18556..19347)
|
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUB5_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1889_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19391..19669)
|
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tRNA/rRNA methyltransferase (EC:2.1.1.-)
tRNA (Cytidine/uridine-2'-O-)-methyltransferase TrmJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCN9_9RHIZ
|