name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1900_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1868)
|
LysM protein LysM {ECO:0000313|EMBL:EYR78050.1}; EC=6.1.1.15 {ECO:0000313|EMBL:EYR78050.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000362B415
rbh
peptidoglycan-binding lysin domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2134..2649
|
LOG family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXE7_9RHIZ
rbh
LOG family protein {ECO:0000313|EMBL:EYR78049.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K06966
|
|
SCNpilot_expt_1000_bf_scaffold_1900_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2694..3638)
|
Protein RarD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWA7_9RHIZ
rbh
Protein RarD {ECO:0000313|EMBL:EYR78047.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1900_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3747..3941)
|
Putative AIPM/hcit synthase family transferase {ECO:0000313|EMBL:EYR78046.1}; EC=2.3.3.- {ECO:0000313|EMBL:EYR78046.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AIPM/hcit synthase family transferase (EC:2.3.3.-)
Putative AIPM/hcit synthase family transferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D587_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1900_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4154..4888
|
Uncharacterized protein {ECO:0000313|EMBL:CEG08372.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1900_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4789..5331)
|
Putative AIPM/hcit synthase family transferase {ECO:0000313|EMBL:EYR78046.1}; EC=2.3.3.- {ECO:0000313|EMBL:EYR78046.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
leua1; 2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
Putative AIPM/hcit synthase family transferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D587_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1900_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5438..5995)
|
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pip; proline iminopeptidase Pip (EC:3.4.11.5)
Proline iminopeptidase Pip n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0J6_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1900_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6357..6839)
|
Putative glutathione-dependent formaldehyde-activating protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXE3_9RHIZ
rbh
Putative glutathione-dependent formaldehyde-activating protein {ECO:0000313|EMBL:EYR78044.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glutathione-dependent formaldehyde-activating protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6851..6970)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG85_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78043.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1900_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6967..7464)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWA3_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78042.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glutathione-dependent formaldehyde-activating protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7461..7943)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D580_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78041.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7940..9286)
|
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Cysteine--tRNA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0J0_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1900_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9795..9977
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG82_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78038.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1900_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9982..10755)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW98_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78037.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10816..11250
|
Putative NUDIX family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D575_9RHIZ
Putative NUDIX family protein {ECO:0000313|EMBL:EYR78036.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NUDIX hydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_1900_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11247..11672
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0I7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78035.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11777..12034
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036A7DB8
Uncharacterized protein {ECO:0000313|EMBL:EYR78034.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12051..12818
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMK4_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78033.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_19
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12805..13425)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036E09D8
Uncharacterized protein {ECO:0000313|EMBL:EJL52418.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13596..14441
|
Folate-binding protein YgfZ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFQ5_9RHIZ
rbh
Folate-binding protein YgfZ {ECO:0000313|EMBL:EYR78030.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aminomethyltransferase (glycine cleavage); K06980
|
|
SCNpilot_expt_1000_bf_scaffold_1900_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14438..15067
|
hydrolase n=1 Tax=Rhizobium meliloti RepID=UPI00030F7F20
Putative hydrolases of HD superfamily {ECO:0000313|EMBL:EYR78029.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K06952
|
|
SCNpilot_expt_1000_bf_scaffold_1900_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15070..15603
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWT7_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78028.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1900_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15600..16577
|
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A309_RHIFH
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78027.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1900_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16591..17112)
|
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Superoxide dismutase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZF7_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1900_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17179..18084)
|
Putative nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EYR78024.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EYR78024.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nadC; nicotinate-mononucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
rbh
Putative nicotinate-nucleotide pyrophosphorylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJ16_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1900_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18124..19722)
|
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aspartate oxidase n=1 Tax=Rhizobium giardinii RepID=UPI0003767F07
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1900_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19900..20979)
|
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
quinolinate synthetase n=1 Tax=Rhizobium giardinii RepID=UPI00037D5029
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1900_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21151..22377)
|
MFS permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX20_9RHIZ
rbh
MFS permease {ECO:0000313|EMBL:EYR84342.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
probabable MFS permease
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1900_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22680..23672
|
Magnesium transport protein CorA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5Y6_9RHIZ
rbh
Magnesium transport protein CorA {ECO:0000313|EMBL:EYR84341.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)
|
|
SCNpilot_expt_1000_bf_scaffold_1900_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23692..24537)
|
Fe-S protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXY3_9RHIZ
rbh
Fe-S protein {ECO:0000313|EMBL:EYR84339.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative Fe-S protein
rbh
|