ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10892

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10892_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

597..1070
DNA (474bp) protein (158aa)
Deoxyribodipyrimidine photo-lyase Phr {ECO:0000313|EMBL:EYR77497.1}; EC=4.1.99.3 {ECO:0000313|EMBL:EYR77497.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photo-lyase Phr n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUH1_9RHIZ
SCNpilot_expt_1000_bf_scaffold_10892_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1072..1665)
DNA (594bp) protein (198aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN (EC:2.7.4.23)
Ribose 1,5-bisphosphate phosphokinase PhnN n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX78_9RHIZ
SCNpilot_expt_1000_bf_scaffold_10892_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1662..2795)
DNA (1134bp) protein (378aa)
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:EYR77499.1}; EC=3.6.1.63 {ECO:0000313|EMBL:EYR77499.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase PhnM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1S6_9RHIZ rbh
phnM; phosphonate metabolism protein PhnM; K06162 PhnM protein rbh
SCNpilot_expt_1000_bf_scaffold_10892_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2797..3504)
DNA (708bp) protein (236aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000313|EMBL:EYR77500.1}; EC=2.7.4.23 {ECO:0000313|EMBL:EYR77500.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ribose 1,5-bisphosphate phosphokinase PhnN n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSS4_9RHIZ rbh
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10892_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3634..3921)
DNA (288bp) protein (96aa)
Putative phosphonates transport system permease protein PhnE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCW5_9RHIZ
Putative phosphonates transport system permease protein PhnE {ECO:0000313|EMBL:EYR77501.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phoT; putative phosphate/phosphonate ABC transporter,permease protein; K02042 phosphonate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_10892_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3973..4557)
DNA (585bp) protein (195aa)
Putative phosphonates transport system permease protein PhnE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCW5_9RHIZ
Putative phosphonates transport system permease protein PhnE {ECO:0000313|EMBL:EYR77501.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein
Displaying 6 items

View Taxonomy