ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11339

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11339_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..598
DNA (597bp) protein (199aa)
RlpA-like lipoprotein RlpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV49_9RHIZ
RlpA-like lipoprotein RlpA {ECO:0000313|EMBL:EYR79890.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lipoprotein; K03642 rare lipoprotein A
SCNpilot_expt_1000_bf_scaffold_11339_2
unknown

Not on your lists

comp(778..1065)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11339_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1529..1828
DNA (300bp) protein (100aa)
D-alanyl-D-alanine carboxypeptidase DacC {ECO:0000313|EMBL:EYR79891.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EYR79891.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase DacC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF47_9RHIZ
SCNpilot_expt_1000_bf_scaffold_11339_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1912..2595
DNA (684bp) protein (228aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] rbh
Thymidylate kinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWH0_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_11339_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2592..3623
DNA (1032bp) protein (344aa)
DNA polymerase III subunit delta {ECO:0000313|EMBL:EYR79893.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EYR79893.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZE5_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_11339_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3712..5121
DNA (1410bp) protein (470aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV55_9RHIZ
Displaying 6 items

View Taxonomy