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SCNpilot_expt_1000_bf_scaffold_11850

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11850_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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66..989
DNA (924bp) protein (308aa)
sugar ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000377AE68 rbh
Sugar ABC transporter {ECO:0000313|EMBL:KDP74277.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
inner-membrane translocator; K05832 putative ABC transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_11850_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1004..2251
DNA (1248bp) protein (416aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
kynureninase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003771981
kynureninase
SCNpilot_expt_1000_bf_scaffold_11850_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2266..2952)
DNA (687bp) protein (229aa)
ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373D00A rbh
Putative ATP-binding component of ABC transporter {ECO:0000313|EMBL:AHK45985.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF (LIV-I protein F); K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_11850_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2949..3164)
DNA (216bp) protein (72aa)
ABC transporter related protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNR8_9RHIZ
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP74281.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_11850_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3662..4606)
DNA (945bp) protein (315aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003822F4E
Putative permease component of ABC transporter {ECO:0000313|EMBL:AHK45983.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
branched-chain amino acid transport system permease
SCNpilot_expt_1000_bf_scaffold_11850_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4615..5535)
DNA (921bp) protein (307aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003748BA4 rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AHK45982.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_11850_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5631..6545)
DNA (915bp) protein (305aa)
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376AF41
Putative substrate-binding ABC transporter protein {ECO:0000313|EMBL:AHK45981.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
extracellular ligand binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_11850_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6788..7621)
DNA (834bp) protein (278aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer
tryptophan 2,3-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
tryptophan 2,3-dioxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000366E3C5
Displaying 8 items

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