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SCNpilot_expt_1000_bf_scaffold_3052

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3052_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1039
DNA (1038bp) protein (346aa)
MATE efflux family protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4Z8_NOVAD
Multidrug export protein MepA {ECO:0000313|EMBL:AKH42479.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
MATE efflux family protein
SCNpilot_expt_1000_bf_scaffold_3052_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1089..2807)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y866_9SPHN rbh
AAA-like domain protein {ECO:0000313|EMBL:AKH42481.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K06915
SCNpilot_expt_1000_bf_scaffold_3052_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2851..3630)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLA1_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD49400.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3052_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3627..4541)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4Z5_NOVAD rbh
hypothetical protein; K07090 rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD27078.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_expt_1000_bf_scaffold_3052_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4602..5672)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3S6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49398.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3052_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5669..6688)
DNA (1020bp) protein (340aa)
Putative bacteriophage N4 adsorption protein B n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLV8_9SPHN
Putative bacteriophage N4 adsorption protein B {ECO:0000313|EMBL:GAD49397.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
bacteriophage N4 adsorption protein B; K11740 bacteriophage N4 adsorption protein B
SCNpilot_expt_1000_bf_scaffold_3052_7
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6734..7234
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXQ2_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KEO88585.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3052_8
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7513..7797
DNA (285bp) protein (95aa)
SinR family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEC1_9PROT
CRISPR associated protein Cas2 {ECO:0000313|EMBL:AKI01225.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
SinR family protein
SCNpilot_expt_1000_bf_scaffold_3052_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7851..8807)
DNA (957bp) protein (319aa)
Transposase n=1 Tax=Sphingobium baderi LL03 RepID=T0GZU4_9SPHN rbh
Transposase {ECO:0000313|EMBL:EQB06242.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative transposase for insertion sequence element rbh
SCNpilot_expt_1000_bf_scaffold_3052_10
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8912..9142
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IRZ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO88589.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3052_11
unknown

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comp(9423..9539)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3052_12
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10514..10882)
DNA (369bp) protein (123aa)
Bacteriophage N4 adsorption protein B n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WA88_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO90303.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
Displaying 12 items

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