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SCNpilot_expt_1000_bf_scaffold_3406

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3406_1
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..2825)
DNA (2823bp) protein (941aa)
glycine cleavage system T protein; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4] rbh
Glycine cleavage system T protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLT4_AGRRK rbh
Glycine cleavage system protein T {ECO:0000313|EMBL:KEA03722.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_expt_1000_bf_scaffold_3406_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2920..3855
DNA (936bp) protein (312aa)
Transcriptional regulator protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKA1_9RHIZ rbh
Transcriptional regulator protein {ECO:0000313|EMBL:EHH03871.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
transcriptional regulator protein rbh
SCNpilot_expt_1000_bf_scaffold_3406_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3910..5049)
DNA (1140bp) protein (380aa)
Putative oxidoreductase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0Q8_9RHIZ
Putative short-chain dehydrogenase/oxidoreductase {ECO:0000313|EMBL:AHK45360.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
oxidoreductase
SCNpilot_expt_1000_bf_scaffold_3406_4
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5085..5819)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLE6_AGRRK
hypothetical protein
Asp/Glu/Hydantoin racemase {ECO:0000313|EMBL:EJK87941.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_1000_bf_scaffold_3406_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5882..6721)
DNA (840bp) protein (280aa)
Amino acid ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JLE5_AGRRK rbh
Amino acid ABC transporter {ECO:0000313|EMBL:KEA03726.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
amino acid ABC transporter rbh
SCNpilot_expt_1000_bf_scaffold_3406_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6745..7407)
DNA (663bp) protein (221aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. AP16 RepID=J2DDC6_9RHIZ rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJK87939.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
amino acid ABC transporter rbh
SCNpilot_expt_1000_bf_scaffold_3406_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7407..8051)
DNA (645bp) protein (215aa)
Amino acid ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLE3_AGRRK
Putative permease component of ABC transporter {ECO:0000313|EMBL:AHK45358.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
amino acid ABC transporter
SCNpilot_expt_1000_bf_scaffold_3406_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8048..8326)
DNA (279bp) protein (93aa)
amino acid ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
Amino acid ABC transporter, ATP-binding protein n=3 Tax=Ochrobactrum intermedium RepID=C4WQ24_9RHIZ
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ94367.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
Displaying 8 items

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