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SCNpilot_expt_1000_bf_scaffold_3498

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3498_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..345
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CK92_AGRT5
Strain MEJ076 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02245.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3498_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

364..876
DNA (513bp) protein (171aa)
Succinoglycan biosynthesis protein ExoI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS41_9RHIZ
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ACE92283.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_expt_1000_bf_scaffold_3498_3
unknown

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comp(878..1450)
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1536..1979
DNA (444bp) protein (148aa)
Putative bacteriophage P2 tail protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMD0_9RHIZ
Putative bacteriophage P2 tail protein {ECO:0000313|EMBL:EYR81890.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
bacteriophage P2 tail protein
SCNpilot_expt_1000_bf_scaffold_3498_5
unknown

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comp(1963..2490)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_6
unknown

Not on your lists

2579..2911
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3078..3644)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F001_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81865.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3498_8
unknown

Not on your lists

4006..4095
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_9
unknown

Not on your lists

4589..4849
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_10
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5237..6400)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U962_SINMW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABR60192.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_1000_bf_scaffold_3498_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6411..6860)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0BYM3_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC75547.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3498_12
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7104..8942)
DNA (1839bp) protein (613aa)
Putative regulatory protein RepA n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L4K8_AGRSH rbh
repA; regulatory protein RepA rbh
Putative regulatory protein RepA {ECO:0000313|EMBL:ADY64459.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
SCNpilot_expt_1000_bf_scaffold_3498_13
unknown

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comp(9117..9383)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_14
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9383..9829)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5DXE9_RHILU
Uncharacterized protein {ECO:0000313|EMBL:EKJ97228.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
SCNpilot_expt_1000_bf_scaffold_3498_15
unknown

Not on your lists

comp(9942..10130)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_16
unknown

Not on your lists

comp(10127..10348)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3498_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10309..10518)
DNA (210bp) protein (70aa)
Putative phage transcriptional regulator AlpA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIG3_RHITR
putative phage transcriptional regulator AlpA
Putative phage transcriptional regulator AlpA {ECO:0000313|EMBL:AGB71017.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3498_18
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10593..10967)
DNA (375bp) protein (125aa)
UPI0003CF9A2A related cluster n=1 Tax=unknown RepID=UPI0003CF9A2A
Uncharacterized protein {ECO:0000313|EMBL:ESY59443.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
SCNpilot_expt_1000_bf_scaffold_3498_19
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10951..12141)
DNA (1191bp) protein (397aa)
Phage integrase family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U968_SINMW rbh
phage integrase family protein rbh
Phage integrase family protein {ECO:0000313|EMBL:ABR60198.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Displaying 19 items

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