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SCNpilot_expt_1000_bf_scaffold_9976

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9976_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..278
DNA (276bp) protein (92aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhizobium sp. CF080 RepID=J2QZV9_9RHIZ
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:CDN54015.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
chemotaxis sensory transducer protein
SCNpilot_expt_1000_bf_scaffold_9976_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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473..1405
DNA (933bp) protein (311aa)
Putative transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBD6_9RHIZ rbh
Putative transmembrane protein {ECO:0000313|EMBL:EYR80063.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transmembrane protein rbh
SCNpilot_expt_1000_bf_scaffold_9976_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1579..2196)
DNA (618bp) protein (206aa)
ABC-type transport system, auxiliary component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CR98_9RHIZ rbh
ABC-type transport system, auxiliary component {ECO:0000313|EMBL:EYR80064.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9976_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2331..3275)
DNA (945bp) protein (315aa)
ABC-type transport system involved in resistance to organic solvent, periplasmic component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D095_9RHIZ
ABC-type transport system involved in resistance to organic solvent, periplasmic component {ECO:0000313|EMBL:EYR80065.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
solute-binding component of ABC transporter; K02067 putative ABC transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_9976_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3760..4539)
DNA (780bp) protein (260aa)
Putative ribonucleotide transport ATP-binding protein Mkl n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVR8_9RHIZ rbh
Putative ribonucleotide transport ATP-binding protein Mkl {ECO:0000313|EMBL:EYR80066.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative ATP-binding component of ABC transporter; K02065 putative ABC transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_9976_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4548..5735)
DNA (1188bp) protein (396aa)
ABC transporter permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ET58_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:EYR80067.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K02066 putative ABC transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_9976_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5832..6815
DNA (984bp) protein (328aa)
ycjG; L-Ala-D/L-Glu epimerase (EC:5.1.1.-) rbh
Mandelate racemase/muconate lactonizing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBD1_9RHIZ rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EYR80068.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_9976_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6785..7051)
DNA (267bp) protein (89aa)
Putative 3-phenylpropionic acid transporter HcaT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CR93_9RHIZ
Putative 3-phenylpropionic acid transporter HcaT {ECO:0000313|EMBL:EYR80069.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transport protein transmembrane
Displaying 8 items

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