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SCNpilot_expt_1000_bf_scaffold_5372

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5372_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..2274
DNA (2274bp) protein (758aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
alanyl-tRNA synthetase n=1 Tax=Rhizobium giardinii RepID=UPI00036FFC1B
SCNpilot_expt_1000_bf_scaffold_5372_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2388..3620
DNA (1233bp) protein (411aa)
Diguanylate cyclase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIE3_9RHIZ rbh
Diguanylate cyclase {ECO:0000313|EMBL:EYR79113.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GGDEF family protein
SCNpilot_expt_1000_bf_scaffold_5372_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3677..5353)
DNA (1677bp) protein (559aa)
Transport transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSM5_9RHIZ rbh
Transport transmembrane protein {ECO:0000313|EMBL:EYR79112.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transport transmembrane protein rbh
SCNpilot_expt_1000_bf_scaffold_5372_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5536..5853
DNA (318bp) protein (106aa)
DNA gyrase inhibitor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUB1_9RHIZ
DNA gyrase inhibitor {ECO:0000313|EMBL:EYR79111.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator, AraC family
Displaying 4 items

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