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SCNpilot_expt_1000_bf_scaffold_18631

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_18631_1
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

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comp(53..805)
DNA (753bp) protein (251aa)
Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U772_PHYPA
Predicted protein {ECO:0000313|EMBL:EDQ48481.1}; Flags: Fragment;; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella.;" source="Physcomitrella patens subsp. patens (Moss).;"
SCNpilot_expt_1000_bf_scaffold_18631_2
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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995..2422
DNA (1428bp) protein (476aa)
Hydrophobe/amphiphile efflux-1 HAE1 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214A9_RHOPB
Acriflavine resistance protein B {ECO:0000313|EMBL:KGF69428.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hydrophobe/amphiphile efflux-1 HAE1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_1000_bf_scaffold_18631_3
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2401..3189
DNA (789bp) protein (263aa)
Hydrophobe/amphiphile efflux-1 HAE1 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214A9_RHOPB
Acriflavine resistance protein B {ECO:0000313|EMBL:KGF69428.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hydrophobe/amphiphile efflux-1 HAE1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_1000_bf_scaffold_18631_4
unknown

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3268..3975
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_18631_5
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4241..5035)
DNA (795bp) protein (265aa)
transcriptional regulator (EC:2.7.3.-) rbh
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C195CC rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KGF69425.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_expt_1000_bf_scaffold_18631_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5449..6201
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYL7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81002.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_18631_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6349..7119)
DNA (771bp) protein (257aa)
ABC transporter-like protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FDCE2D
ABC transporter {ECO:0000313|EMBL:EZQ14331.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_expt_1000_bf_scaffold_18631_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7116..7349)
DNA (234bp) protein (78aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC221A
ABC transporter permease {ECO:0000313|EMBL:EXL05923.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
transport system permease; K02015 iron complex transport system permease protein
Displaying 8 items

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