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SCNpilot_expt_1000_bf_scaffold_14493

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14493_1
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1333)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VH18_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_expt_1000_bf_scaffold_14493_2
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1636..2061)
DNA (426bp) protein (142aa)
hypothetical protein BCCGELA001_31398, partial n=1 Tax=Bradyrhizobium sp. CCGE-LA001 RepID=UPI0002AA944D id=5225051 bin=16ft_combo_ws3_JS1 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_1000_bf_scaffold_14493_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2231..2644
DNA (414bp) protein (138aa)
Heavy metal-dependent transcription regulator 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8B3_9RHIZ
Heavy metal-dependent transcription regulator 2 {ECO:0000313|EMBL:EYR77366.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hmrR2; putative transcriptional regulator, merR family protein
SCNpilot_expt_1000_bf_scaffold_14493_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2646..2975)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ER71_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77365.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14493_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2989..3201)
DNA (213bp) protein (71aa)
Transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTM8_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EYR77364.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14493_6
unknown

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3330..3629
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14493_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3742..4818
DNA (1077bp) protein (359aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY87_9RHIZ rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EYR77363.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potD; spermidine/putrescine transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_14493_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5112..5975
DNA (864bp) protein (288aa)
Putrescine transport system permease protein PotH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGQ1_9RHIZ rbh
ABC-type spermidine/putrescine transport system permease component I {ECO:0000313|EMBL:EYR79366.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potB; spermidine/putrescine transport system permease protein
SCNpilot_expt_1000_bf_scaffold_14493_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6283..6573
DNA (291bp) protein (97aa)
Spermidine/putrescine transport system permease protein PotC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEK0_9RHIZ
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:EYR79365.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potC; spermidine/putrescine transport system permease protein; K11070 spermidine/putrescine transport system permease protein
Displaying 9 items

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