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SCNpilot_expt_1000_bf_scaffold_14681

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14681_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..312
DNA (312bp) protein (104aa)
h16_A0274; lactoylglutathione lyase (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5]
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXA4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80510.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_14681_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(296..1843)
DNA (1548bp) protein (516aa)
D-galactarate dehydratase GarD {ECO:0000313|EMBL:EYR80509.1}; EC=4.2.1.42 {ECO:0000313|EMBL:EYR80509.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative D-galactarate dehydratase/Altronate hydrolase (EC:4.2.1.42)
D-galactarate dehydratase GarD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSP6_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_14681_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2007..2753
DNA (747bp) protein (249aa)
Galactonate operon transcriptional repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQ53_9RHIZ rbh
Galactonate operon transcriptional repressor {ECO:0000313|EMBL:EYR80508.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator protein
SCNpilot_expt_1000_bf_scaffold_14681_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2803..3594
DNA (792bp) protein (264aa)
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily (EC:4.2.1.6)
galactonate dehydratase n=1 Tax=Rhizobium meliloti RepID=UPI0002F2F908
Galactonate dehydratase {ECO:0000313|EMBL:KDP72976.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_14681_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3766..3897
DNA (132bp) protein (44aa)
dgoA; galactonate dehydratase; K01684 galactonate dehydratase [EC:4.2.1.6]
Galactonate dehydratase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LME8_RHITR
Galactonate dehydratase protein {ECO:0000313|EMBL:AGB72563.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_14681_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3960..4535)
DNA (576bp) protein (192aa)
Uric acid transporter UacT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXA0_9RHIZ
Uric acid transporter UacT {ECO:0000313|EMBL:EYR80505.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
xanthine permease; K03458 nucleobase:cation symporter-2, NCS2 family
Displaying 6 items

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