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SCNpilot_expt_1000_bf_scaffold_20046

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_20046_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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213..731
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BD364 rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42468.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_20046_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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728..1273
DNA (546bp) protein (182aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP23_RHOPX rbh
conjugative transfer signal peptidase TraF rbh
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:ADU42469.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_20046_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1341..1676
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP24_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42470.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_20046_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1681..2571
DNA (891bp) protein (297aa)
Lytic transglycosylase catalytic n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP25_RHOPX rbh
lytic transglycosylase rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADU42471.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_20046_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3110..3595
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNA1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY79935.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_20046_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3691..4926
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNA1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY79935.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_20046_7
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5452..5769)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67250.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
YheO domain-containing protein
SCNpilot_expt_1000_bf_scaffold_20046_8
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6108..6953
DNA (846bp) protein (282aa)
tnaA; tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1]
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HAMAP-Rule:MF_00544}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
Tryptophanase n=3 Tax=Desulfitobacterium hafniense RepID=Q24Q61_DESHY
SCNpilot_expt_1000_bf_scaffold_20046_9
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6895..7242
DNA (348bp) protein (116aa)
tnaA; tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1]
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HAMAP-Rule:MF_00544}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
Tryptophanase n=3 Tax=Desulfitobacterium hafniense RepID=Q24Q61_DESHY
Displaying 9 items

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