name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_13097_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..927)
|
Formate dehydrogenase, alpha subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXR6_9RHIZ
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EYR79615.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
formate dehydrogenase, alpha subunit
|
|
SCNpilot_expt_1000_bf_scaffold_13097_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(888..1469)
|
Formate dehydrogenase, alpha subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXR6_9RHIZ
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EYR79615.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
formate dehydrogenase, alpha subunit
|
|
SCNpilot_expt_1000_bf_scaffold_13097_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1474..3030)
|
Putative formate dehydrogenase beta subunit {ECO:0000313|EMBL:CCF21193.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CCF21193.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
fdsB; NAD-dependent formate dehydrogenase subunit beta (EC:1.2.1.2)
rbh
Putative formate dehydrogenase beta subunit n=1 Tax=Rhizobium sp. RepID=L0NJD5_RHISP
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13097_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3027..3446)
|
Formate dehydrogenase protein, gamma subunit {ECO:0000313|EMBL:EYR79618.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EYR79618.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fdsG; formate dehydrogenase subunit gamma (EC:1.2.1.2); K00127 formate dehydrogenase, gamma subunit
Formate dehydrogenase protein, gamma subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ64_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_13097_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3632..4576)
|
Hydrogen peroxide-inducible activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ91_9RHIZ
rbh
Hydrogen peroxide-inducible activator {ECO:0000313|EMBL:EYR79619.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
LysR-type transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13097_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4628..5578
|
Acrylyl-CoA reductase AcuI {ECO:0000313|EMBL:EYR79620.1}; EC=1.3.1.84 {ECO:0000313|EMBL:EYR79620.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Acrylyl-CoA reductase AcuI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUP2_9RHIZ
rbh
zinc-binding dehydrogenase family oxidoreductase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13097_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5621..6391)
|
short-chain type dehydrogenase/reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES75_9RHIZ
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EYR79621.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
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SCNpilot_expt_1000_bf_scaffold_13097_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6528..7259
|
DeoR faimly transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00036129C5
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EYR79622.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glpR; glycerol-3-phosphate regulon repressor
|
|
SCNpilot_expt_1000_bf_scaffold_13097_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7373..8893
|
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Glycerol-3-phosphate dehydrogenase GlpD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EY53_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13097_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8935..10017
|
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EYR79624.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EYR79624.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHD2_9RHIZ
rbh
putative ATP-binding protein of sugar ABC transporter; K02023 multiple sugar transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13097_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10028..11098
|
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 {ECO:0000313|EMBL:EYR79625.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EYR79625.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXE5_9RHIZ
rbh
ABC transporter; K02023 multiple sugar transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13097_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11101..11964
|
Putative permease component of ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6B3_9RHIZ
rbh
Putative permease component of ABC transporter {ECO:0000313|EMBL:EYR79626.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sugar transport system, permease; K02025 multiple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_13097_13
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12645..12857
|
Trehalose transport system permease protein SugB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1R8_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:KEQ04128.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
ABC transporter; K02026 multiple sugar transport system permease protein
|
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SCNpilot_expt_1000_bf_scaffold_13097_14
unknown
|
Not on your lists |
comp(12933..13049)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_13097_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13353..13688
|
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J1TI63_9RHIZ
Putative glycerol-3-phosphate and glycerol ABC transporter,periplasmic solute-binding component {ECO:0000313|EMBL:EYR79629.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
|