name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_13258_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1558
|
Long-chain-fatty-acid--CoA ligase FadD {ECO:0000313|EMBL:EYR83217.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EYR83217.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
long-chain fatty acid--CoA ligase n=1 Tax=Rhizobium giardinii RepID=UPI0003711866
rbh
fadD; FadD protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13258_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3067..3303
|
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=2 Tax=Rhizobium meliloti RepID=K0P0P6_RHIML
|
|
SCNpilot_expt_1000_bf_scaffold_13258_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4412..5341)
|
Fructokinase Frk {ECO:0000313|EMBL:EYR83220.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EYR83220.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Fructokinase Frk n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CKN1_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13258_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5404..6102)
|
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C4X9_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13258_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6242..6670)
|
Putative membrane protein contains DoxX family domain n=1 Tax=Rhizobium sp. RepID=L0NB95_RHISP
Uncharacterized protein {ECO:0000313|EMBL:EYR83222.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DoxX family protein; K15977 putative oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_13258_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6913..7887)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6G0_9RHIZ
Proline racemase {ECO:0000313|EMBL:EYR83228.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_13258_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8032..8838
|
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cpdA; cpdA: 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA (EC:3.1.4.17)
rbh
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WYJ1_RHIFR
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_13258_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9174..9587
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQ63_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83230.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_13258_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9632..9979)
|
Putative lipoprotein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSQ7_9RHIZ
Putative lipoprotein {ECO:0000313|EMBL:EYR83231.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lipoprotein
|