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SCNpilot_expt_1000_bf_scaffold_15027

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15027_1
unknown

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comp(2..331)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15027_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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545..1411
DNA (867bp) protein (289aa)
Mannose-1-phosphate guanylyltransferase NoeJ {ECO:0000313|EMBL:EYR79725.1}; EC=2.7.7.13 {ECO:0000313|EMBL:EYR79725.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
bifunctional mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase protein (EC:5.3.1.8 2.7.7.13)
Mannose-1-phosphate guanylyltransferase NoeJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBL3_9RHIZ
SCNpilot_expt_1000_bf_scaffold_15027_3
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1512..1871
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000369C7B2
Putative membrane protein {ECO:0000313|EMBL:CDM61572.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15027_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1893..2336)
DNA (444bp) protein (148aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EV15_9RHIZ
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EYR83939.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein
SCNpilot_expt_1000_bf_scaffold_15027_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2521..2979)
DNA (459bp) protein (153aa)
Putative periplasmic serine endoprotease DegP {ECO:0000313|EMBL:EYR82552.1}; EC=3.4.21.107 {ECO:0000313|EMBL:EYR82552.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative periplasmic serine endoprotease DegP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5Z5_9RHIZ
periplasmic serine protease, Do/DeqQ family
SCNpilot_expt_1000_bf_scaffold_15027_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3003..4046)
DNA (1044bp) protein (348aa)
Putative periplasmic serine endoprotease DegP {ECO:0000313|EMBL:EYR82552.1}; EC=3.4.21.107 {ECO:0000313|EMBL:EYR82552.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
serine protease; K01362 [EC:3.4.21.-]
Putative periplasmic serine endoprotease DegP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5Z5_9RHIZ
Displaying 6 items

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