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SCNpilot_expt_1000_bf_scaffold_15610

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15610_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..977)
DNA (975bp) protein (325aa)
Protein translocase subunit SecY n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI37_RHITR
secY; preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_15610_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1204..1677)
DNA (474bp) protein (158aa)
50S ribosomal protein L15 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJK2_RHITR
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_15610_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1691..1894)
DNA (204bp) protein (68aa)
50S ribosomal protein L30 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYV3_9RHIZ
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpmD; putative 50S ribosomal protein L30
SCNpilot_expt_1000_bf_scaffold_15610_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1908..2474)
DNA (567bp) protein (189aa)
30S ribosomal protein S5 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU96_9RHIZ rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
SCNpilot_expt_1000_bf_scaffold_15610_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2543..2911
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J568_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65775.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_15610_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2915..3424)
DNA (510bp) protein (170aa)
50S ribosomal protein L6 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F1Z5_9RHIZ
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
SCNpilot_expt_1000_bf_scaffold_15610_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3467..3754)
DNA (288bp) protein (96aa)
30S ribosomal protein S8 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGP8_9RHIZ
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpsH; 30S ribosomal protein S8
Displaying 7 items

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