name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4615_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..792
|
Cystathionine gamma-synthase MetB {ECO:0000313|EMBL:EYR80378.1}; EC=2.5.1.48 {ECO:0000313|EMBL:EYR80378.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Cystathionine gamma-synthase MetB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D141_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_4615_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
812..1516
|
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXR2_9RHIZ
rbh
5,10-methenyltetrahydrofolate synthetase
|
|
SCNpilot_expt_1000_bf_scaffold_4615_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1480..2757)
|
Major facilitator superfamily protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGP7_9RHIZ
rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EYR80376.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
inner membrane transport protein YeaN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2754..3431)
|
Putative transcriptional regulator protein, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWT4_9RHIZ
rbh
Putative transcriptional regulator protein, GntR family {ECO:0000313|EMBL:EYR80375.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4615_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3837..4868)
|
Proline racemase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXQ5_9RHIZ
rbh
Proline racemase {ECO:0000313|EMBL:EYR80367.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
proline racemase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5036..5653
|
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGN8_9RHIZ
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR80366.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4615_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5792..6496
|
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETA8_9RHIZ
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR80304.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6611..7573
|
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBI7_9RHIZ
rbh
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:EYR80305.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4615_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7836..8873)
|
Malate/L-lactate dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0E6_9RHIZ
rbh
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:EYR80307.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
malate/L-lactate dehydrogenase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9024..10541
|
NADP-dependent fatty aldehyde dehydrogenase AldH {ECO:0000313|EMBL:EYR80308.1}; EC=1.2.1.4 {ECO:0000313|EMBL:EYR80308.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aldH; NADP-dependent fatty aldehyde dehydrogenase (EC:1.2.1.4)
rbh
NADP-dependent fatty aldehyde dehydrogenase AldH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVV8_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10721..11530
|
Amino acid ABC transporter substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETA4_9RHIZ
rbh
Amino acid ABC transporter substrate binding protein {ECO:0000313|EMBL:EYR80309.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Periplasmic component of amino acid ABC-type transporter/signal transduction system
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11946..12254
|
Amine acid ABC transporter, permease protein His/Glu/Gln/Arg/opine family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBI2_9RHIZ
Amine acid ABC transporter, permease protein His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EYR80310.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
|
|
SCNpilot_expt_1000_bf_scaffold_4615_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12266..12916
|
Putative amino acid ABC transporter permease protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRE4_9RHIZ
rbh
Putative amino acid ABC transporter permease protein {ECO:0000313|EMBL:EYR80311.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gltK; amino acid ABC transporter permease
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12909..13631
|
ABC-type polar amino acid transport system, ATPase component (EC:3.6.3.-)
rbh
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0E1_9RHIZ
rbh
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:EYR80312.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4615_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13639..14889
|
D-amino acid dehydrogenase small subunit {ECO:0000313|EMBL:EYR80313.1}; EC=1.4.99.1 {ECO:0000313|EMBL:EYR80313.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative D-amino acid dehydrogenase protein; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino acid dehydrogenase small subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVV4_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4615_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14999..15172
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ET99_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80314.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|