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SCNpilot_expt_1000_bf_scaffold_4626

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4626_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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28..363
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ26_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77715.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4626_2
unknown

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406..1071
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4626_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(881..1732)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B1A4_RHILS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS58608.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_4626_4
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1958..2659)
DNA (702bp) protein (234aa)
LrgB family protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YGT5_PARAH
LrgB family protein
LrgB family protein {ECO:0000313|EMBL:AGT10678.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_4626_5
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2652..3026)
DNA (375bp) protein (125aa)
LrgA family protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZG0_PARAH
LrgA family protein
LrgA family protein {ECO:0000313|EMBL:AGT10677.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_4626_6
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3023..4054)
DNA (1032bp) protein (344aa)
pld3; pyridoxal4-dehydrogenase Pld (EC:1.1.1.107) rbh
Pyridoxal4-dehydrogenase Pld {ECO:0000313|EMBL:AGI72478.1}; EC=1.1.1.107 {ECO:0000313|EMBL:AGI72478.1};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
Pyridoxal4-dehydrogenase Pld n=1 Tax=Octadecabacter arcticus 238 RepID=M9RL56_9RHOB rbh
SCNpilot_expt_1000_bf_scaffold_4626_7
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4044..5093)
DNA (1050bp) protein (350aa)
Putative oxidoreductase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RIU1_9RHOB rbh
putative oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:AGI72479.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4626_8
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5090..7027)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RRS1_9RHOB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGI72480.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4626_9
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7024..7437)
DNA (414bp) protein (138aa)
Monosaccharide ABC-transporter transmembrane protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RQ13_9RHOB
monosaccharide ABC-transporter transmembrane protein
Monosaccharide ABC-transporter transmembrane protein {ECO:0000313|EMBL:AGI72481.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4626_10
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7431..8018)
DNA (588bp) protein (196aa)
Monosaccharide ABC-transporter transmembrane protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RQ13_9RHOB
monosaccharide ABC-transporter transmembrane protein
Monosaccharide ABC-transporter transmembrane protein {ECO:0000313|EMBL:AGI72481.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4626_11
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8040..9392)
DNA (1353bp) protein (451aa)
Monosaccharide ABC-transporter ATP-binding protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RJZ7_9RHOB rbh
monosaccharide ABC-transporter ATP-binding protein rbh
Monosaccharide ABC-transporter ATP-binding protein {ECO:0000313|EMBL:AGI72482.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4626_12
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9558..10520)
DNA (963bp) protein (321aa)
Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR rbh
D-ribose-binding protein {ECO:0000313|EMBL:AHM75234.1}; TaxID=1443113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica LC20.;"
putative ABC transporter periplasmic binding protein rbh
SCNpilot_expt_1000_bf_scaffold_4626_13
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10817..11632
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RIU5_9RHOB rbh
short-chain dehydrogenase/reductase rbh
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:AGI72484.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4626_14
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11669..12532
DNA (864bp) protein (288aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZG5_PARAH
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Displaying 14 items

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