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SCNpilot_expt_1000_bf_scaffold_4656

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4656_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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301..2154
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVD6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79133.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ycbB; hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4656_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2159..2959)
DNA (801bp) protein (267aa)
Streptomycin 3''-kinase AphE {ECO:0000313|EMBL:EYR79134.1}; EC=2.7.1.87 {ECO:0000313|EMBL:EYR79134.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aphE; streptomycin 3''-kinase (EC:2.7.1.87); K10673 streptomycin 3"-kinase [EC:2.7.1.87]
Streptomycin 3''-kinase AphE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZX1_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4656_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2979..3653)
DNA (675bp) protein (225aa)
Phosphoglycolate phosphatase Gph {ECO:0000313|EMBL:EYR79135.1}; EC=3.1.3.18 {ECO:0000313|EMBL:EYR79135.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase Gph n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQV0_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4656_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3844..4542
DNA (699bp) protein (233aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6]
Ribose-5-phosphate isomerase A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAZ2_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4656_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4561..5100
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EST7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79137.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K09924 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4656_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5200..6060
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVE1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79138.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4656_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6097..6432)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZX9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79139.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4656_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6686..6910
DNA (225bp) protein (75aa)
Glutathione reductase Gor {ECO:0000313|EMBL:EYR79140.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EYR79140.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gor; glutathione reductase; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Glutathione reductase Gor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQV7_9RHIZ
Displaying 8 items

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