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SCNpilot_expt_1000_bf_scaffold_4676

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4676_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..895
DNA (894bp) protein (298aa)
Uncharacterized protein of phosphonate metabolism {ECO:0000313|EMBL:EYR77508.1}; EC=4.7.1.1 {ECO:0000313|EMBL:EYR77508.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX84_9RHIZ rbh
phosphonate metabolism PhnJ; K06163 PhnJ protein rbh
SCNpilot_expt_1000_bf_scaffold_4676_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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892..1668
DNA (777bp) protein (259aa)
Putative phosphonates utilization ATP-binding protein PhnK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUH8_9RHIZ rbh
Putative phosphonates utilization ATP-binding protein PhnK {ECO:0000313|EMBL:EYR77507.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phnK; phosphonate C-P lyase system protein PhnK; K05781 putative phosphonate transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_4676_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1733..2440
DNA (708bp) protein (236aa)
Phosphonate C-P lyase system protein PhnL {ECO:0000313|EMBL:EYR77506.1}; EC=2.7.8.37 {ECO:0000313|EMBL:EYR77506.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCW8_9RHIZ rbh
phnL; Phosphonates transport ATP-binding protein PhnL rbh
SCNpilot_expt_1000_bf_scaffold_4676_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2437..3051
DNA (615bp) protein (205aa)
Phosphonate metabolim protein, transferase hexapeptide repeat family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSS9_9RHIZ rbh
Phosphonate metabolim protein, transferase hexapeptide repeat family {ECO:0000313|EMBL:EYR77505.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphonate metabolim protein, transferase hexapeptide repeat family
SCNpilot_expt_1000_bf_scaffold_4676_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3193..4041
DNA (849bp) protein (283aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphonate ABC transporter ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
Phosphonates import ATP-binding protein PhnC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1T4_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4676_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4122..5027
DNA (906bp) protein (302aa)
Phosphonate ABC transporter periplasmic phosphonate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX81_9RHIZ rbh
Phosphonate ABC transporter periplasmic phosphonate binding protein {ECO:0000313|EMBL:EYR77503.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phoD; putative phosphate/phosphonate ABC transporter,periplasmic substrate-binding protein; K02044 phosphonate transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_4676_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5101..6063
DNA (963bp) protein (321aa)
Putative phosphonates transport system permease protein PhnE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUH4_9RHIZ rbh
Putative phosphonates transport system permease protein PhnE {ECO:0000313|EMBL:EYR77502.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phnE2; phosphonates transport system permease protein phnE rbh
SCNpilot_expt_1000_bf_scaffold_4676_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6073..6453
DNA (381bp) protein (127aa)
Putative phosphonates transport system permease protein PhnE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCW5_9RHIZ
Putative phosphonates transport system permease protein PhnE {ECO:0000313|EMBL:EYR77501.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phnE; phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein
Displaying 8 items

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