name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4923_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..323)
|
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A996_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:EYR83513.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4923_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(418..822)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7T1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83515.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4923_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(874..2364)
|
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glpK; glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ03_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4923_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2549..3322
|
D-beta-hydroxybutyrate dehydrogenase BdhA {ECO:0000313|EMBL:EYR83517.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EYR83517.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D-beta-hydroxybutyrate dehydrogenase BdhA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEL2_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4923_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3362..4183
|
Xanthine dehydrogenase accessory protein XdhC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUI9_9RHIZ
rbh
Xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:EYR83518.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
xdhC; xanthine dehydrogenase accessory protein XdhC; K07402 xanthine dehydrogenase accessory factor
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4923_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4180..4365)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3I9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83519.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4923_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4445..5359
|
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYU2_9RHIZ
rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR83520.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4923_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5500..6723
|
Arabinose efflux permease family protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L5D5_9RHIZ
rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJJ28707.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
major facilitator superfamily 1 protein
|
|
SCNpilot_expt_1000_bf_scaffold_4923_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6891..8198
|
Guanine deaminase GuaD {ECO:0000313|EMBL:EYR83522.1}; EC=3.5.4.3 {ECO:0000313|EMBL:EYR83522.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Guanine deaminase GuaD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEK9_9RHIZ
rbh
guaD1; guanine deaminase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4923_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8405..8899)
|
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ureidoglycolate lyase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3I4_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4923_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8951..9094)
|
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase {ECO:0000313|EMBL:EYR83525.1}; EC=4.1.1.n1 {ECO:0000313|EMBL:EYR83525.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYT5_9RHIZ
OHCU decarboxylase
|
|
SCNpilot_expt_1000_bf_scaffold_4923_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9091..9462)
|
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase {ECO:0000313|EMBL:EYR83525.1}; EC=4.1.1.n1 {ECO:0000313|EMBL:EYR83525.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYT5_9RHIZ
OHCU decarboxylase
|
|
SCNpilot_expt_1000_bf_scaffold_4923_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9459..10391)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVZ1_9RHIZ
rbh
Putative urate catabolism protein {ECO:0000313|EMBL:EYR83526.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative urate catabolism protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4923_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10544..10921
|
PRC-barrel protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJT5_9RHIZ
PRC-barrel protein {ECO:0000313|EMBL:EYR83527.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4923_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10928..12106)
|
Oxidoreductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZW1_9RHIZ
rbh
Oxidoreductase {ECO:0000313|EMBL:EYR83528.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_4923_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12531..12821
|
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000313|EMBL:EYR83529.1}; EC=1.5.-.- {ECO:0000313|EMBL:EYR83529.1};; EC=2.1.1.61 {ECO:0000313|EMBL:EYR83529.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D8M3_9RHIZ
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4923_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12826..16470)
|
Sensor protein GacS {ECO:0000313|EMBL:EYR83530.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EYR83530.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sensor protein GacS n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D495_9RHIZ
rbh
two component sensor kinase/response regulator hybrid
|
|
SCNpilot_expt_1000_bf_scaffold_4923_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16686..18278
|
Trimethylamine methyltransferase MttB {ECO:0000313|EMBL:EYR83531.1}; EC=2.1.1.250 {ECO:0000313|EMBL:EYR83531.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
Trimethylamine methyltransferase MttB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F004_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4923_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18283..18666)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJS9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83532.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|