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SCNpilot_expt_1000_bf_scaffold_7483

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7483_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1171
DNA (1170bp) protein (390aa)
Transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D222_9RHIZ rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EYR78087.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7483_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1214..2107
DNA (894bp) protein (298aa)
UPI0003CEC65B related cluster n=1 Tax=unknown RepID=UPI0003CEC65B
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DNA repair protein
SCNpilot_expt_1000_bf_scaffold_7483_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2110..4599
DNA (2490bp) protein (830aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
UPI0003CFFAC9 related cluster n=1 Tax=unknown RepID=UPI0003CFFAC9
ATP-dependent DNA ligase LigD phosphoesterase {ECO:0000313|EMBL:EYR77993.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 3 items

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