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SCNpilot_expt_1000_bf_scaffold_7820

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7820_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..83
DNA (81bp) protein (27aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY27_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84126.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_7820_2
unknown

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comp(149..889)
DNA (741bp) protein (247aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7820_3
unknown

Not on your lists

957..1613
DNA (657bp) protein (219aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7820_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2722..3447
DNA (726bp) protein (242aa)
putative nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EV88_9RHIZ
Nicotinic acid phosphoribosyltransferase {ECO:0000313|EMBL:EYR84125.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_7820_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3505..3840
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDR1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84124.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7820_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3876..5114)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTN4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR84123.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7820_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5154..6038)
DNA (885bp) protein (295aa)
Putative membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2P0_9RHIZ rbh
Putative membrane protein {ECO:0000313|EMBL:EYR84122.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_7820_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6047..6685)
DNA (639bp) protein (213aa)
Ribonuclease D (EC:3.1.26.3); K03684 ribonuclease D [EC:3.1.13.5] rbh
Ribonuclease D n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY22_9RHIZ rbh
Ribonuclease D {ECO:0000313|EMBL:EYR84121.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_7820_9
unknown

Not on your lists

6783..7067
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7820_10
unknown

Not on your lists

comp(7455..7568)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7820_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7955..9412
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003701A0F
Putative chemoreceptor McpE {ECO:0000313|EMBL:EYR82038.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
methyl-accepting chemotaxis protein
Displaying 11 items

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