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SCNpilot_expt_1000_bf_scaffold_7850

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7850_1
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..559)
DNA (558bp) protein (186aa)
MmgE/PrpD family protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R189_9RHOB
MmgE/PrpD family protein {ECO:0000313|EMBL:EPX85647.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
MmgE/PrpD family protein
SCNpilot_expt_1000_bf_scaffold_7850_2
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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808..1656
DNA (849bp) protein (283aa)
glutamine ABC transporter substrate-binding protein n=1 Tax=Bacillus megaterium RepID=UPI0003469F47
glnH; glutamine ABC transporter glutamine-binding protein GlnH; K10039 putative glutamine transport system substrate-binding protein
Glutamine ABC transporter, glutamine-binding protein GlnH {ECO:0000313|EMBL:ADE67398.1}; TaxID=545693 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium (strain ATCC 12872 / QMB1551).;"
SCNpilot_expt_1000_bf_scaffold_7850_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2055..2957)
DNA (903bp) protein (301aa)
calcium-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003792CA2
Uncharacterized protein {ECO:0000313|EMBL:EWY37806.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SMP-30/gluconolaconase/LRE domain-containing protein
SCNpilot_expt_1000_bf_scaffold_7850_4
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3014..3991)
DNA (978bp) protein (326aa)
DeoR family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TGU6_RHORU rbh
DeoR family transcriptional regulator rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ABC22140.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_expt_1000_bf_scaffold_7850_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4033..4422)
DNA (390bp) protein (130aa)
rbsK-1; ribokinase 1 (EC:2.7.1.15)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F75BF6
Sugar kinase, ribokinase {ECO:0000313|EMBL:KFC70925.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_7850_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4415..4936)
DNA (522bp) protein (174aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F75BF6
Sugar kinase, ribokinase {ECO:0000313|EMBL:KFC70925.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_7850_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4995..5987)
DNA (993bp) protein (331aa)
Rhizopine-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLN8_9RHIZ
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EYR82461.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rhizopine-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_7850_8
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6042..6956)
DNA (915bp) protein (305aa)
D-ribose transporter subunit membrane component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHX9_9RHIZ
D-ribose transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCV03733.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Ribose/xylose/arabinose/galactoside ABC transporter permease; K10440 ribose transport system permease protein
Displaying 8 items

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