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SCNpilot_expt_1000_bf_scaffold_7918

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7918_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..176
DNA (174bp) protein (58aa)
Putative ATPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERV3_9RHIZ
Putative ATPase {ECO:0000313|EMBL:EYR83377.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7918_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(183..1349)
DNA (1167bp) protein (389aa)
Aspartate aminotransferase AspC {ECO:0000313|EMBL:EYR83378.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EYR83378.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Aspartate aminotransferase AspC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CA03_9RHIZ rbh
aspartate aminotransferase
SCNpilot_expt_1000_bf_scaffold_7918_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1485..1859)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9WYV0_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB01661.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7918_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2004..4229)
DNA (2226bp) protein (742aa)
katE; catalase; K03781 catalase [EC:1.11.1.6] rbh
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
catalase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FB60D rbh
SCNpilot_expt_1000_bf_scaffold_7918_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4484..5467
DNA (984bp) protein (328aa)
Signal transduction histidine kinase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LFU7_AGRSH rbh
PAS domain-containing S-box protein {ECO:0000313|EMBL:EYR81004.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_7918_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5464..5793
DNA (330bp) protein (110aa)
Two component sensor kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVB4_RHITR
PAS domain-containing S-box protein {ECO:0000313|EMBL:EYR81004.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
two component sensor kinase
SCNpilot_expt_1000_bf_scaffold_7918_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6137..6325
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83391.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
Displaying 7 items

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