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SCNpilot_expt_1000_bf_scaffold_7932

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7932_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..838)
DNA (837bp) protein (279aa)
preprotein translocase subunit SecA n=1 Tax=Kaistia granuli RepID=UPI0003736A62
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
secA; preprotein translocase, SecA subunit
SCNpilot_expt_1000_bf_scaffold_7932_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(835..1530)
DNA (696bp) protein (232aa)
preprotein translocase subunit SecA n=1 Tax=Rhizobium giardinii RepID=UPI00036AC071
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_expt_1000_bf_scaffold_7932_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1479..1766)
DNA (288bp) protein (96aa)
Protein translocase subunit SecA n=1 Tax=Rhizobium sp. (strain NGR234) RepID=SECA_RHISN
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_expt_1000_bf_scaffold_7932_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1893..2897
DNA (1005bp) protein (335aa)
Foldase protein PrsA 2 {ECO:0000313|EMBL:EYR79745.1}; EC=5.2.1.8 {ECO:0000313|EMBL:EYR79745.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Foldase protein PrsA 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7Q4_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_7932_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2846..3997
DNA (1152bp) protein (384aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQJ3_9RHIZ
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_7932_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4008..4793
DNA (786bp) protein (262aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EYR79743.1}; EC=2.3.1.- {ECO:0000313|EMBL:EYR79743.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Acetyltransferase, GNAT family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT28_9RHIZ rbh
acetyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_7932_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4790..5212
DNA (423bp) protein (141aa)
Mutator protein MutT {ECO:0000313|EMBL:EYR79742.1}; EC=3.6.1.- {ECO:0000313|EMBL:EYR79742.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mutator MutT protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Mutator protein MutT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXN2_9RHIZ
SCNpilot_expt_1000_bf_scaffold_7932_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5323..5643
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRG2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79741.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7932_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5770..6705)
DNA (936bp) protein (312aa)
Malonyl-[acyl-carrier protein] O-methyltransferase BioC {ECO:0000313|EMBL:EYR79739.1}; EC=2.1.1.197 {ECO:0000313|EMBL:EYR79739.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Malonyl-[acyl-carrier protein] O-methyltransferase BioC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETC0_9RHIZ rbh
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_7932_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6767..7558
DNA (792bp) protein (264aa)
Putative amidophosphoribosyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVX3_9RHIZ rbh
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:EYR79738.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphoribosyltransferase protein
SCNpilot_expt_1000_bf_scaffold_7932_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7594..7848
DNA (255bp) protein (85aa)
Glutaredoxin 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0G6_9RHIZ
Glutaredoxin 3 {ECO:0000313|EMBL:EYR79737.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
grxC; glutaredoxin; K03676 glutaredoxin 3
SCNpilot_expt_1000_bf_scaffold_7932_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7860..8717
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRG7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79736.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative amidohydrolase
SCNpilot_expt_1000_bf_scaffold_7932_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8714..9142
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBK4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79735.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7932_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9142..9720
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETC5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79734.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7932_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9721..10239)
DNA (519bp) protein (173aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64 2.1.1.222)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVX7_9RHIZ
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 15 items

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