name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_6287_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
325..633
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC78_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83856.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conserved membrane protein of unknown function
|
|
SCNpilot_expt_1000_bf_scaffold_6287_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
721..1278
|
Phage prohead protease, HK97 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWS8_9RHIZ
rbh
Prohead peptidase {ECO:0000313|EMBL:EYR83855.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gp35; phage prohead protease; K06904
|
|
SCNpilot_expt_1000_bf_scaffold_6287_3
unknown
|
Not on your lists |
comp(1275..1484)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1622..2515
|
capsid protein n=1 Tax=Rhizobium giardinii RepID=UPI0003604AC0
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EYR83854.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phage major capsid protein HK97 family
|
|
SCNpilot_expt_1000_bf_scaffold_6287_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2781..3350
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003601E18
Phage protein PhiE125 gp8 family {ECO:0000313|EMBL:EYR81164.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3350..3682
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000374735E
Phage head-tail adaptor, putative, SPP1 family {ECO:0000313|EMBL:EYR81165.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phage head-tail adaptor
|
|
SCNpilot_expt_1000_bf_scaffold_6287_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3679..4086
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEI6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81166.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4114..4521
|
Phage major tail protein, TP901-1 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGP1_9RHIZ
Phage major tail protein, TP901-1 family {ECO:0000313|EMBL:EYR81167.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phage major tail protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4521..4877
|
Uncharacterized protein {ECO:0000313|EMBL:EYR81168.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_10
unknown
|
Not on your lists |
4964..5077
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5081..5620
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCT8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81170.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5944..6552
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXD9_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR81171.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7058..7405
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EF93_9RHIZ
Phage protein {ECO:0000313|EMBL:EYR81172.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_14
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7839..8900
|
Uncharacterized protein (Fragment) n=1 Tax=Rhizobium sp. CF080 RepID=J2IHS3_9RHIZ
Gene transfer agent (GTA) orfg15, like protein {ECO:0000313|EMBL:CDN53228.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
conserved exported protein of unknown function
|
|
SCNpilot_expt_1000_bf_scaffold_6287_15
unknown
|
Not on your lists |
comp(9654..9848)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_16
unknown
|
Not on your lists |
comp(9957..10757)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6287_17
Cleome spinosa, Cleome, Brassicales, rosids, Streptophyta, Viridiplantae
|
Not on your lists |
comp(10754..11407)
|
Prp9 n=1 Tax=Cleome spinosa RepID=B2BXP0_9ROSI
Prp9 {ECO:0000313|EMBL:ABW81077.1}; TaxID=228870 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Cleome.;" source="Cleome spinosa.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6287_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11657..11863
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDV0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81175.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6287_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12215..12886
|
Virulence transcriptional regulatory protein PhoP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2T2_9RHIZ
rbh
Virulence transcriptional regulatory protein PhoP {ECO:0000313|EMBL:EYR81177.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rcaC; Protein rcaC
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6287_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12876..14294
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sensor protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY64_9RHIZ
rbh
integral membrane sensor signal transduction histidine kinase
|
|
SCNpilot_expt_1000_bf_scaffold_6287_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14404..14835
|
Putative outer-membrane lipoprotein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVC5_9RHIZ
Putative outer-membrane lipoprotein {ECO:0000313|EMBL:EYR81179.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lipa1; 17 kDa surface antigen
|
|
SCNpilot_expt_1000_bf_scaffold_6287_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14931..16070
|
Cytochrome c-type biogenesis protein CycH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDU5_9RHIZ
rbh
Cytochrome c-type biogenesis protein CycH {ECO:0000313|EMBL:EYR81180.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cycH; cytochrome c-type biogenesis protein CycH; K02200 cytochrome c-type biogenesis protein CcmH
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6287_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16067..16546
|
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTS0_9RHIZ
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Cytochrome c-type biogenesis protein ccmE; K02197 cytochrome c-type biogenesis protein CcmE
|
|
SCNpilot_expt_1000_bf_scaffold_6287_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16543..17250
|
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217P1_RHOPB
cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:ABD87395.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|