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SCNpilot_expt_1000_bf_scaffold_6380

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6380_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..407
DNA (405bp) protein (135aa)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037C5FEC
ABC-type spermidine/putrescine transport systemATPase component {ECO:0000313|EMBL:EYR79364.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potA; spermidine/putrescine transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_6380_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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413..979
DNA (567bp) protein (189aa)
Beta-lactamase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGR2_9RHIZ rbh
Zn-dependent hydrolase {ECO:0000313|EMBL:EYR79363.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
beta-lactamase rbh
SCNpilot_expt_1000_bf_scaffold_6380_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1024..1140
DNA (117bp) protein (39aa)
Beta-lactamase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGR2_9RHIZ
Zn-dependent hydrolase {ECO:0000313|EMBL:EYR79363.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
beta-lactamase
SCNpilot_expt_1000_bf_scaffold_6380_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1153..2586
DNA (1434bp) protein (478aa)
Putative aldehyde dehydrogenase SAB2006c (EC:1.2.1.3) rbh
Putative aldehyde dehydrogenase n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JRS2_9RHIZ rbh
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:ELT50670.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
SCNpilot_expt_1000_bf_scaffold_6380_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2973..3737
DNA (765bp) protein (255aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI00037594AE
Putative permease, DMT superfamily {ECO:0000313|EMBL:EYR79361.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6380_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3744..5165)
DNA (1422bp) protein (474aa)
L-arabonate dehydratase AraC {ECO:0000313|EMBL:EYR79359.1}; EC=4.2.1.25 {ECO:0000313|EMBL:EYR79359.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Dihydroxy-acid dehydratase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ45_RHITR
dihydroxy-acid dehydratase
Displaying 6 items

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