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SCNpilot_expt_1000_bf_scaffold_6420

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6420_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..514)
DNA (513bp) protein (171aa)
aapP; general L-amino acid transport ATP-binding protein AapP (EC:3.6.3.21); K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
General L-amino acid transport ATP-binding protein AapP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBX9_9RHIZ
General L-amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYR79980.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_6420_2
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(538..1341)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E7413A
Putative transcriptional regulator {ECO:0000313|EMBL:AHF77418.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6420_3
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1355..2020)
DNA (666bp) protein (222aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC52_SPISS
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADK79932.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_expt_1000_bf_scaffold_6420_4
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2023..2697)
DNA (675bp) protein (225aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC51_SPISS
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADK79931.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_expt_1000_bf_scaffold_6420_5
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2709..3440)
DNA (732bp) protein (244aa)
Putative Glutamate transport ATP-binding protein GluA n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZZN4_9ACTO
Putative Glutamate transport ATP-binding protein GluA {ECO:0000313|EMBL:EPH43920.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
ABC transporter
SCNpilot_expt_1000_bf_scaffold_6420_6
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3513..4418)
DNA (906bp) protein (302aa)
Extracellular solute-binding protein family 3 n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC49_SPISS
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADK79929.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_expt_1000_bf_scaffold_6420_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4658..5860
DNA (1203bp) protein (401aa)
Putative aspartate transaminase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQH6_TISMK rbh
aspC; putative aspartate transaminase rbh
Putative aspartate transaminase {ECO:0000313|EMBL:AFK55014.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_1000_bf_scaffold_6420_8
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5860..6450
DNA (591bp) protein (197aa)
dhbK; dihydroxyacetone kinase; K00863 dihydroxyacetone kinase [EC:2.7.1.29]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F030F2
Dihydroxyacetone kinase {ECO:0000313|EMBL:KJF72871.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Displaying 8 items

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