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SCNpilot_expt_1000_bf_scaffold_25283

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_25283_1
unknown

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2..70
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_25283_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(72..785)
DNA (714bp) protein (238aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase Pth n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D476_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_25283_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(857..1606)
DNA (750bp) protein (250aa)
ABC transporter, amino acid substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV89_9RHIZ rbh
ABC transporter, amino acid substrate binding protein {ECO:0000313|EMBL:EYR79005.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
amino acid ABC transporter substrate binding protein
SCNpilot_expt_1000_bf_scaffold_25283_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1680..2012)
DNA (333bp) protein (111aa)
Putative signaling protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF78_9RHIZ
Putative signaling protein {ECO:0000313|EMBL:EYR79006.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
signaling protein
SCNpilot_expt_1000_bf_scaffold_25283_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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2200..2679
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HCCB10043 RepID=V6U954_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIJ72193.1}; Flags: Fragment;; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Displaying 5 items

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