ggKbase home page

SCNpilot_expt_1000_bf_scaffold_25990

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_25990_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36..671)
DNA (636bp) protein (212aa)
Glutathione S-transferase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX08_9RHIZ rbh
Glutathione S-transferase protein {ECO:0000313|EMBL:EYR79110.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glutathione S-transferase protein
SCNpilot_expt_1000_bf_scaffold_25990_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(782..1540)
DNA (759bp) protein (253aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1K8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_25990_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1540..1992)
DNA (453bp) protein (151aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
isocitrate dehydrogenase n=1 Tax=Rhizobium giardinii RepID=UPI00036C4DC3
SCNpilot_expt_1000_bf_scaffold_25990_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2209..2631
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSL2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79108.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_25990_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2927..3499
DNA (573bp) protein (191aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tRNA (Cytidine/uridine-2'-O-)-methyltransferase TrmJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCN9_9RHIZ
RNA methyltransferase, TrmH family, group 1
Displaying 5 items

View Taxonomy