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SCNpilot_expt_1000_bf_scaffold_12204

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12204_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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126..707
DNA (582bp) protein (194aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] rbh
Shikimate kinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQA6_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_12204_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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718..1905
DNA (1188bp) protein (396aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aroB; 3-dehydroquinate synthase AroB (EC:4.2.3.4) rbh
3-dehydroquinate synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZD7_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_12204_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1845..2714
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUT4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR83564.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12204_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2776..3051)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESB5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83565.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12204_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3180..3803
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAF7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR83566.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
19,0 kDa protein in cobS 5'region rbh
SCNpilot_expt_1000_bf_scaffold_12204_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3898..4920
DNA (1023bp) protein (341aa)
Aerobic cobaltochelatase subunit CobS {ECO:0000313|EMBL:EYR83567.1}; EC=6.6.1.2 {ECO:0000313|EMBL:EYR83567.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cobS; aerobic cobaltochelatase, CobS subunit (EC:6.6.1.2); K09882 cobaltochelatase CobS [EC:6.6.1.2]
Aerobic cobaltochelatase subunit CobS n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRB9_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_12204_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5159..5497
DNA (339bp) protein (113aa)
Aerobic cobaltochelatase subunit CobT {ECO:0000313|EMBL:EYR83568.1}; EC=6.6.1.2 {ECO:0000313|EMBL:EYR83568.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cobalt chelatase large subunit; K09883 cobaltochelatase CobT [EC:6.6.1.2]
Aerobic cobaltochelatase subunit CobT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVY8_9RHIZ
Displaying 7 items

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