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SCNpilot_expt_1000_bf_scaffold_12816

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12816_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1016
DNA (1014bp) protein (338aa)
Putative membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXN1_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EYR79775.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conserved membrane-spanning protein
SCNpilot_expt_1000_bf_scaffold_12816_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1246..2352)
DNA (1107bp) protein (369aa)
Leu/Ile/Val-binding protein 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0Z5_9RHIZ rbh
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR79781.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
solute-binding component of ABC transporter; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_12816_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2657..3232
DNA (576bp) protein (192aa)
membrane protein n=1 Tax=Rhizobium meliloti RepID=UPI00036E4649 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79782.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_12816_4
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3463..3633)
DNA (171bp) protein (57aa)
RNA polymerase sigma factor RpoD n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0M7_POLGS
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
Displaying 4 items

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