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SCNpilot_expt_1000_bf_scaffold_22779

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_22779_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..181
DNA (180bp) protein (60aa)
NADH-quinone oxidoreductase subunit F 1 {ECO:0000313|EMBL:EYR80711.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EYR80711.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NADH-quinone oxidoreductase subunit F 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYR9_9RHIZ
nuoF; NADH-quinone oxidoreductase subunit f
SCNpilot_expt_1000_bf_scaffold_22779_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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186..845
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVY0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR80712.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_22779_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1665..2993
DNA (1329bp) protein (443aa)
NADH-quinone oxidoreductase subunit {ECO:0000313|EMBL:EYR80713.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EYR80713.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nqo3; NADH dehydrogenase subunit G (EC:1.6.5.3); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEJ2_9RHIZ
SCNpilot_expt_1000_bf_scaffold_22779_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3014..4060
DNA (1047bp) protein (349aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nuoH2; NADH dehydrogenase subunit H; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit H n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUG8_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_22779_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4097..4588
DNA (492bp) protein (164aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nuoi1; NADH dehydrogenase I subunit I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit I n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3G6_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_22779_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4760..5314
DNA (555bp) protein (185aa)
NADH-quinone oxidoreductase subunit J {ECO:0000313|EMBL:EYR80716.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EYR80716.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NADH dehydrogenase subunit J; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit J n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYR4_9RHIZ
SCNpilot_expt_1000_bf_scaffold_22779_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5340..5648
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nuoK1; NADH dehydrogenase subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K 1 n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=NUOK1_RHIE6
SCNpilot_expt_1000_bf_scaffold_22779_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6167..6460
DNA (294bp) protein (98aa)
NADH dehydrogenase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Rhizobium giardinii RepID=UPI00035D3FFA
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:EYR80718.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 8 items

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