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SCNpilot_expt_1000_bf_scaffold_16890

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_16890_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..612)
DNA (612bp) protein (204aa)
Aminomethyltransferase GcvT {ECO:0000313|EMBL:EYR81713.1}; EC=2.1.2.10 {ECO:0000313|EMBL:EYR81713.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glycine cleavage T protein (aminomethyl transferase); K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase GcvT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV35_9RHIZ
SCNpilot_expt_1000_bf_scaffold_16890_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(609..1211)
DNA (603bp) protein (201aa)
Aminomethyltransferase GcvT {ECO:0000313|EMBL:EYR81713.1}; EC=2.1.2.10 {ECO:0000313|EMBL:EYR81713.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glycine cleavage system protein T; K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase GcvT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV35_9RHIZ
SCNpilot_expt_1000_bf_scaffold_16890_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1208..2749)
DNA (1542bp) protein (514aa)
UPI0003CE851D related cluster n=1 Tax=unknown RepID=UPI0003CE851D
Phytoene dehydrogenase {ECO:0000313|EMBL:EYR81714.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phytoene dehydrogenase-like oxidoreductase
SCNpilot_expt_1000_bf_scaffold_16890_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2736..3818)
DNA (1083bp) protein (361aa)
FAD dependent oxidoreductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D241_9RHIZ
FAD dependent oxidoreductase {ECO:0000313|EMBL:EYR81715.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_16890_5
unknown

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3851..4423
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_16890_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4520..5338
DNA (819bp) protein (273aa)
Type 11 methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT34_9RHIZ rbh
Type 11 methyltransferase {ECO:0000313|EMBL:EYR81716.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
type 11 methyltransferase
SCNpilot_expt_1000_bf_scaffold_16890_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5335..6045
DNA (711bp) protein (237aa)
Transcriptional regulator, TetR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CD66_9RHIZ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EYR81717.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_16890_8
unknown

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6073..6174
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 8 items

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